Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNCAIPQ9Y6H5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNCAIPQ9Y6H5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 AC016769.1-201ENST00000409132 1010 ntBASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 AP004607.4-201ENST00000530158 1459 ntBASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
SNCAIPQ9Y6H5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SNCAIPQ9Y6H5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNCAIPQ9Y6H5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNCAIPQ9Y6H5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNCAIPQ9Y6H5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNCAIPQ9Y6H5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.01■■□□□ 1.75
SNCAIPQ9Y6H5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.01■■□□□ 1.75
SNCAIPQ9Y6H5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SNCAIPQ9Y6H5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.01■■□□□ 1.75
SNCAIPQ9Y6H5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.01■■□□□ 1.75
SNCAIPQ9Y6H5 AC004854.2-201ENST00000608450 1441 ntBASIC26.01■■□□□ 1.75
SNCAIPQ9Y6H5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SNCAIPQ9Y6H5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26■■□□□ 1.75
SNCAIPQ9Y6H5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
SNCAIPQ9Y6H5 COX20-201ENST00000366528 568 ntTSL 2 BASIC26■■□□□ 1.75
SNCAIPQ9Y6H5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SNCAIPQ9Y6H5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26■■□□□ 1.75
SNCAIPQ9Y6H5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26■■□□□ 1.75
SNCAIPQ9Y6H5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26■■□□□ 1.75
SNCAIPQ9Y6H5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
SNCAIPQ9Y6H5 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.99■■□□□ 1.75
SNCAIPQ9Y6H5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
SNCAIPQ9Y6H5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
SNCAIPQ9Y6H5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.99■■□□□ 1.75
SNCAIPQ9Y6H5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.99■■□□□ 1.75
SNCAIPQ9Y6H5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
SNCAIPQ9Y6H5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SNCAIPQ9Y6H5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
SNCAIPQ9Y6H5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
SNCAIPQ9Y6H5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SNCAIPQ9Y6H5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
SNCAIPQ9Y6H5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SNCAIPQ9Y6H5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SNCAIPQ9Y6H5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNCAIPQ9Y6H5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.97■■□□□ 1.75
SNCAIPQ9Y6H5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNCAIPQ9Y6H5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNCAIPQ9Y6H5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
SNCAIPQ9Y6H5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.97■■□□□ 1.75
SNCAIPQ9Y6H5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNCAIPQ9Y6H5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.97■■□□□ 1.75
SNCAIPQ9Y6H5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.97■■□□□ 1.75
SNCAIPQ9Y6H5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SNCAIPQ9Y6H5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNCAIPQ9Y6H5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNCAIPQ9Y6H5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNCAIPQ9Y6H5 AC026185.1-201ENST00000445748 174 ntBASIC25.96■■□□□ 1.75
SNCAIPQ9Y6H5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.96■■□□□ 1.75
SNCAIPQ9Y6H5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNCAIPQ9Y6H5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SNCAIPQ9Y6H5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNCAIPQ9Y6H5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SNCAIPQ9Y6H5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SNCAIPQ9Y6H5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SNCAIPQ9Y6H5 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.95■■□□□ 1.74
SNCAIPQ9Y6H5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
SNCAIPQ9Y6H5 AC104771.1-201ENST00000603335 964 ntBASIC25.95■■□□□ 1.74
SNCAIPQ9Y6H5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SNCAIPQ9Y6H5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms