Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
CDK11AQ9UQ88 RARA-203ENST00000394086 2008 ntTSL 2 BASIC34.59■■■■□ 3.13
CDK11AQ9UQ88 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC34.58■■■■□ 3.13
CDK11AQ9UQ88 AC006015.1-201ENST00000429970 570 ntBASIC34.58■■■■□ 3.13
CDK11AQ9UQ88 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC34.58■■■■□ 3.13
CDK11AQ9UQ88 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC34.58■■■■□ 3.13
CDK11AQ9UQ88 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDK11AQ9UQ88 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC34.57■■■■□ 3.13
CDK11AQ9UQ88 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.13
CDK11AQ9UQ88 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
CDK11AQ9UQ88 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
CDK11AQ9UQ88 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
CDK11AQ9UQ88 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.12
CDK11AQ9UQ88 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
CDK11AQ9UQ88 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC34.57■■■■□ 3.12
CDK11AQ9UQ88 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC34.57■■■■□ 3.12
CDK11AQ9UQ88 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC34.57■■■■□ 3.12
CDK11AQ9UQ88 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC34.57■■■■□ 3.12
CDK11AQ9UQ88 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
CDK11AQ9UQ88 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC34.56■■■■□ 3.12
CDK11AQ9UQ88 KRT18P61-201ENST00000585825 1298 ntBASIC34.56■■■■□ 3.12
CDK11AQ9UQ88 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
CDK11AQ9UQ88 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
CDK11AQ9UQ88 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC34.55■■■■□ 3.12
CDK11AQ9UQ88 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDK11AQ9UQ88 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDK11AQ9UQ88 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDK11AQ9UQ88 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDK11AQ9UQ88 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC34.55■■■■□ 3.12
CDK11AQ9UQ88 AC138932.3-201ENST00000567634 1902 ntBASIC34.55■■■■□ 3.12
CDK11AQ9UQ88 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDK11AQ9UQ88 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CDK11AQ9UQ88 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC34.54■■■■□ 3.12
CDK11AQ9UQ88 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
CDK11AQ9UQ88 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC34.54■■■■□ 3.12
CDK11AQ9UQ88 EED-207ENST00000528180 1745 ntTSL 5 BASIC34.54■■■■□ 3.12
CDK11AQ9UQ88 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CDK11AQ9UQ88 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC34.54■■■■□ 3.12
CDK11AQ9UQ88 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CDK11AQ9UQ88 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
CDK11AQ9UQ88 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CDK11AQ9UQ88 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CDK11AQ9UQ88 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC34.53■■■■□ 3.12
CDK11AQ9UQ88 GALNS-213ENST00000569433 723 ntTSL 3 BASIC34.53■■■■□ 3.12
CDK11AQ9UQ88 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC34.53■■■■□ 3.12
CDK11AQ9UQ88 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CDK11AQ9UQ88 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
CDK11AQ9UQ88 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CDK11AQ9UQ88 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
CDK11AQ9UQ88 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC34.52■■■■□ 3.12
CDK11AQ9UQ88 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC34.52■■■■□ 3.12
CDK11AQ9UQ88 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC34.52■■■■□ 3.12
CDK11AQ9UQ88 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC34.51■■■■□ 3.12
CDK11AQ9UQ88 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC34.51■■■■□ 3.12
CDK11AQ9UQ88 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
CDK11AQ9UQ88 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC34.51■■■■□ 3.12
CDK11AQ9UQ88 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC34.51■■■■□ 3.12
CDK11AQ9UQ88 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC34.51■■■■□ 3.12
CDK11AQ9UQ88 AC080038.1-201ENST00000611274 1154 ntBASIC34.51■■■■□ 3.12
CDK11AQ9UQ88 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC34.51■■■■□ 3.12
CDK11AQ9UQ88 AC068587.7-201ENST00000641602 218 ntBASIC34.51■■■■□ 3.12
CDK11AQ9UQ88 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC34.5■■■■□ 3.11
CDK11AQ9UQ88 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CDK11AQ9UQ88 MED17-227ENST00000640521 2047 ntTSL 5 BASIC34.5■■■■□ 3.11
CDK11AQ9UQ88 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CDK11AQ9UQ88 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 SHD-204ENST00000599689 1729 ntTSL 5 BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC34.49■■■■□ 3.11
CDK11AQ9UQ88 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDK11AQ9UQ88 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDK11AQ9UQ88 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDK11AQ9UQ88 GAS2L1P2-201ENST00000436355 1356 ntBASIC34.48■■■■□ 3.11
CDK11AQ9UQ88 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC34.47■■■■□ 3.11
CDK11AQ9UQ88 AC137761.2-201ENST00000561729 223 ntBASIC34.47■■■■□ 3.11
CDK11AQ9UQ88 AC145350.3-201ENST00000569033 163 ntBASIC34.47■■■■□ 3.11
CDK11AQ9UQ88 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CDK11AQ9UQ88 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
CDK11AQ9UQ88 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CDK11AQ9UQ88 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 AC016769.1-201ENST00000409132 1010 ntBASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 HLA-L-209ENST00000420110 1011 ntBASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 DENND3-207ENST00000518347 850 ntTSL 2 BASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 RAP2CP1-201ENST00000605103 478 ntBASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CDK11AQ9UQ88 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms