Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC27.13■■□□□ 1.93
ZC3H4Q9UPT8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ZC3H4Q9UPT8 MFSD11-216ENST00000590393 1141 ntBASIC27.12■■□□□ 1.93
ZC3H4Q9UPT8 AC008687.6-201ENST00000596318 630 ntBASIC27.12■■□□□ 1.93
ZC3H4Q9UPT8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.12■■□□□ 1.93
ZC3H4Q9UPT8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
ZC3H4Q9UPT8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 AC069152.1-201ENST00000438030 544 ntBASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 AC231657.2-201ENST00000624556 255 ntBASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.11■■□□□ 1.93
ZC3H4Q9UPT8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ZC3H4Q9UPT8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
ZC3H4Q9UPT8 ALDH1A3-203ENST00000557963 1670 ntBASIC27.1■■□□□ 1.93
ZC3H4Q9UPT8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ZC3H4Q9UPT8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ZC3H4Q9UPT8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ZC3H4Q9UPT8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC27.1■■□□□ 1.93
ZC3H4Q9UPT8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ZC3H4Q9UPT8 AC073210.2-201ENST00000430369 194 ntBASIC27.1■■□□□ 1.93
ZC3H4Q9UPT8 BX005040.4-201ENST00000637145 1518 ntBASIC27.1■■□□□ 1.93
ZC3H4Q9UPT8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
ZC3H4Q9UPT8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
ZC3H4Q9UPT8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC27.09■■□□□ 1.93
ZC3H4Q9UPT8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.09■■□□□ 1.93
ZC3H4Q9UPT8 TESC-206ENST00000541210 936 ntTSL 3 BASIC27.09■■□□□ 1.93
ZC3H4Q9UPT8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ZC3H4Q9UPT8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC27.08■■□□□ 1.93
ZC3H4Q9UPT8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 FP325331.1-202ENST00000623531 1380 ntBASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 AL138781.1-201ENST00000566567 1274 ntBASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZC3H4Q9UPT8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 SLC29A4P1-201ENST00000398760 971 ntBASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 ITM2C-210ENST00000620962 501 ntBASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
ZC3H4Q9UPT8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ZC3H4Q9UPT8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.05■■□□□ 1.92
ZC3H4Q9UPT8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
ZC3H4Q9UPT8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ZC3H4Q9UPT8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.04■■□□□ 1.92
ZC3H4Q9UPT8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
ZC3H4Q9UPT8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ZC3H4Q9UPT8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ZC3H4Q9UPT8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
ZC3H4Q9UPT8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ZC3H4Q9UPT8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ZC3H4Q9UPT8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
ZC3H4Q9UPT8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 AC133041.1-202ENST00000642053 222 ntBASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ZC3H4Q9UPT8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.03■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms