Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 BX842568.3-201ENST00000418104 571 ntBASIC23.64■■□□□ 1.37
SNX25Q9H3E2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNX25Q9H3E2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNX25Q9H3E2 AC027682.1-201ENST00000562846 899 ntBASIC23.64■■□□□ 1.37
SNX25Q9H3E2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SNX25Q9H3E2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNX25Q9H3E2 AC004687.1-201ENST00000579003 1625 ntBASIC23.63■■□□□ 1.37
SNX25Q9H3E2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNX25Q9H3E2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNX25Q9H3E2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNX25Q9H3E2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNX25Q9H3E2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNX25Q9H3E2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SNX25Q9H3E2 AC233992.3-201ENST00000607491 485 ntBASIC23.63■■□□□ 1.37
SNX25Q9H3E2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNX25Q9H3E2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.63■■□□□ 1.37
SNX25Q9H3E2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SNX25Q9H3E2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 SLC47A1P1-202ENST00000449666 945 ntBASIC23.62■■□□□ 1.37
SNX25Q9H3E2 AC091305.1-201ENST00000479476 895 ntBASIC23.62■■□□□ 1.37
SNX25Q9H3E2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNX25Q9H3E2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNX25Q9H3E2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
SNX25Q9H3E2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SNX25Q9H3E2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.61■■□□□ 1.37
SNX25Q9H3E2 AC099791.1-201ENST00000416440 715 ntBASIC23.61■■□□□ 1.37
SNX25Q9H3E2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SNX25Q9H3E2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.61■■□□□ 1.37
SNX25Q9H3E2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
SNX25Q9H3E2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.6■■□□□ 1.37
SNX25Q9H3E2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
SNX25Q9H3E2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNX25Q9H3E2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.6■■□□□ 1.37
SNX25Q9H3E2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNX25Q9H3E2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNX25Q9H3E2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.6■■□□□ 1.37
SNX25Q9H3E2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SNX25Q9H3E2 RASA4CP-201ENST00000424092 1398 ntBASIC23.6■■□□□ 1.37
SNX25Q9H3E2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.6■■□□□ 1.37
SNX25Q9H3E2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SNX25Q9H3E2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SNX25Q9H3E2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.59■■□□□ 1.37
SNX25Q9H3E2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.59■■□□□ 1.37
SNX25Q9H3E2 OR2I1P-207ENST00000453522 948 ntBASIC23.59■■□□□ 1.37
SNX25Q9H3E2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SNX25Q9H3E2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.59■■□□□ 1.37
SNX25Q9H3E2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.59■■□□□ 1.37
SNX25Q9H3E2 CA15P2-201ENST00000611168 834 ntBASIC23.59■■□□□ 1.37
SNX25Q9H3E2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SNX25Q9H3E2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SNX25Q9H3E2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX25Q9H3E2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SNX25Q9H3E2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.58■■□□□ 1.37
SNX25Q9H3E2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX25Q9H3E2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX25Q9H3E2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNX25Q9H3E2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.58■■□□□ 1.37
SNX25Q9H3E2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SNX25Q9H3E2 AC010525.1-201ENST00000585559 441 ntBASIC23.58■■□□□ 1.37
SNX25Q9H3E2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SNX25Q9H3E2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.58■■□□□ 1.36
SNX25Q9H3E2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SNX25Q9H3E2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
SNX25Q9H3E2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.58■■□□□ 1.36
SNX25Q9H3E2 DUSP8P3-201ENST00000399571 1760 ntBASIC23.57■■□□□ 1.36
SNX25Q9H3E2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNX25Q9H3E2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SNX25Q9H3E2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.57■■□□□ 1.36
SNX25Q9H3E2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNX25Q9H3E2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SNX25Q9H3E2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNX25Q9H3E2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNX25Q9H3E2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
SNX25Q9H3E2 AC126544.1-201ENST00000580842 1059 ntBASIC23.57■■□□□ 1.36
SNX25Q9H3E2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
SNX25Q9H3E2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNX25Q9H3E2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.56■■□□□ 1.36
SNX25Q9H3E2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SNX25Q9H3E2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.56■■□□□ 1.36
SNX25Q9H3E2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNX25Q9H3E2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SNX25Q9H3E2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SNX25Q9H3E2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.56■■□□□ 1.36
SNX25Q9H3E2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNX25Q9H3E2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNX25Q9H3E2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.56■■□□□ 1.36
SNX25Q9H3E2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNX25Q9H3E2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNX25Q9H3E2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNX25Q9H3E2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms