Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
THUMPD3Q9BV44 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.09■□□□□ 0.97
THUMPD3Q9BV44 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.08■□□□□ 0.97
THUMPD3Q9BV44 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
THUMPD3Q9BV44 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
THUMPD3Q9BV44 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
THUMPD3Q9BV44 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
THUMPD3Q9BV44 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
THUMPD3Q9BV44 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
THUMPD3Q9BV44 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
THUMPD3Q9BV44 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
THUMPD3Q9BV44 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD3Q9BV44 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD3Q9BV44 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.07■□□□□ 0.96
THUMPD3Q9BV44 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD3Q9BV44 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD3Q9BV44 AL031848.2-201ENST00000607670 837 ntBASIC21.07■□□□□ 0.96
THUMPD3Q9BV44 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.07■□□□□ 0.96
THUMPD3Q9BV44 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
THUMPD3Q9BV44 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.07■□□□□ 0.96
THUMPD3Q9BV44 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.07■□□□□ 0.96
THUMPD3Q9BV44 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
THUMPD3Q9BV44 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THUMPD3Q9BV44 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
THUMPD3Q9BV44 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
THUMPD3Q9BV44 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THUMPD3Q9BV44 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THUMPD3Q9BV44 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
THUMPD3Q9BV44 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
THUMPD3Q9BV44 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.05■□□□□ 0.96
THUMPD3Q9BV44 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
THUMPD3Q9BV44 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THUMPD3Q9BV44 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 RARRES2P1-201ENST00000474487 481 ntBASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.04■□□□□ 0.96
THUMPD3Q9BV44 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 AC007375.3-201ENST00000600936 2314 ntBASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms