Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
SCAF11Q99590 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC32.22■■■□□ 2.75
SCAF11Q99590 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC32.22■■■□□ 2.75
SCAF11Q99590 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
SCAF11Q99590 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
SCAF11Q99590 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
SCAF11Q99590 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC32.21■■■□□ 2.75
SCAF11Q99590 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SCAF11Q99590 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC32.21■■■□□ 2.75
SCAF11Q99590 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC32.21■■■□□ 2.75
SCAF11Q99590 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC32.21■■■□□ 2.75
SCAF11Q99590 ALDH1A3-203ENST00000557963 1670 ntBASIC32.2■■■□□ 2.75
SCAF11Q99590 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
SCAF11Q99590 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SCAF11Q99590 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC32.2■■■□□ 2.75
SCAF11Q99590 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
SCAF11Q99590 NCF1B-203ENST00000435988 1254 ntBASIC32.2■■■□□ 2.75
SCAF11Q99590 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC32.2■■■□□ 2.75
SCAF11Q99590 TMEM191A-211ENST00000637163 1067 ntBASIC32.2■■■□□ 2.75
SCAF11Q99590 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SCAF11Q99590 MFF-208ENST00000409616 1247 ntTSL 5 BASIC32.19■■■□□ 2.74
SCAF11Q99590 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
SCAF11Q99590 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC32.19■■■□□ 2.74
SCAF11Q99590 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
SCAF11Q99590 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC32.19■■■□□ 2.74
SCAF11Q99590 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC32.19■■■□□ 2.74
SCAF11Q99590 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC32.19■■■□□ 2.74
SCAF11Q99590 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
SCAF11Q99590 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC32.18■■■□□ 2.74
SCAF11Q99590 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC32.18■■■□□ 2.74
SCAF11Q99590 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
SCAF11Q99590 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC32.18■■■□□ 2.74
SCAF11Q99590 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SCAF11Q99590 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SCAF11Q99590 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC32.17■■■□□ 2.74
SCAF11Q99590 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC32.17■■■□□ 2.74
SCAF11Q99590 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SCAF11Q99590 MIR663A-201ENST00000385250 93 ntBASIC32.17■■■□□ 2.74
SCAF11Q99590 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SCAF11Q99590 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
SCAF11Q99590 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SCAF11Q99590 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SCAF11Q99590 AP004607.4-201ENST00000530158 1459 ntBASIC32.17■■■□□ 2.74
SCAF11Q99590 AC004854.2-201ENST00000608450 1441 ntBASIC32.17■■■□□ 2.74
SCAF11Q99590 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SCAF11Q99590 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SCAF11Q99590 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
SCAF11Q99590 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC32.16■■■□□ 2.74
SCAF11Q99590 SHD-204ENST00000599689 1729 ntTSL 5 BASIC32.16■■■□□ 2.74
SCAF11Q99590 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
SCAF11Q99590 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC32.16■■■□□ 2.74
SCAF11Q99590 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC32.16■■■□□ 2.74
SCAF11Q99590 AC066615.1-201ENST00000640911 628 ntBASIC32.16■■■□□ 2.74
SCAF11Q99590 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
SCAF11Q99590 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SCAF11Q99590 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SCAF11Q99590 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SCAF11Q99590 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC32.14■■■□□ 2.74
SCAF11Q99590 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC32.14■■■□□ 2.74
SCAF11Q99590 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC32.14■■■□□ 2.74
SCAF11Q99590 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
SCAF11Q99590 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SCAF11Q99590 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SCAF11Q99590 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC32.14■■■□□ 2.74
SCAF11Q99590 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
SCAF11Q99590 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
SCAF11Q99590 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SCAF11Q99590 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
SCAF11Q99590 EED-207ENST00000528180 1745 ntTSL 5 BASIC32.13■■■□□ 2.73
SCAF11Q99590 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
SCAF11Q99590 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC32.13■■■□□ 2.73
SCAF11Q99590 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
SCAF11Q99590 EI24-204ENST00000527235 1625 ntTSL 5 BASIC32.13■■■□□ 2.73
SCAF11Q99590 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC32.13■■■□□ 2.73
SCAF11Q99590 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SCAF11Q99590 COX20-201ENST00000366528 568 ntTSL 2 BASIC32.12■■■□□ 2.73
SCAF11Q99590 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
SCAF11Q99590 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
SCAF11Q99590 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC32.12■■■□□ 2.73
SCAF11Q99590 TMEM202-AS1-202ENST00000565181 2325 ntBASIC32.12■■■□□ 2.73
SCAF11Q99590 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SCAF11Q99590 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
SCAF11Q99590 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SCAF11Q99590 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
SCAF11Q99590 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SCAF11Q99590 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SCAF11Q99590 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
SCAF11Q99590 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
SCAF11Q99590 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC32.1■■■□□ 2.73
SCAF11Q99590 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC32.1■■■□□ 2.73
SCAF11Q99590 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC32.1■■■□□ 2.73
SCAF11Q99590 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC32.1■■■□□ 2.73
SCAF11Q99590 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
SCAF11Q99590 AC135731.1-201ENST00000569415 2548 ntBASIC32.09■■■□□ 2.73
SCAF11Q99590 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
SCAF11Q99590 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC32.09■■■□□ 2.73
SCAF11Q99590 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
SCAF11Q99590 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
SCAF11Q99590 CD99P1-205ENST00000527459 561 ntBASIC32.09■■■□□ 2.73
SCAF11Q99590 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC32.08■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms