Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC00479Q96M42 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.9■□□□□ 0.3
LINC00479Q96M42 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LINC00479Q96M42 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LINC00479Q96M42 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.89■□□□□ 0.3
LINC00479Q96M42 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.89■□□□□ 0.3
LINC00479Q96M42 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC00479Q96M42 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
LINC00479Q96M42 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LINC00479Q96M42 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00479Q96M42 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00479Q96M42 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LINC00479Q96M42 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC00479Q96M42 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00479Q96M42 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00479Q96M42 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00479Q96M42 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC00479Q96M42 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00479Q96M42 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00479Q96M42 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00479Q96M42 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00479Q96M42 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC00479Q96M42 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00479Q96M42 AC087742.1-201ENST00000575880 1738 ntBASIC16.88■□□□□ 0.29
LINC00479Q96M42 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LINC00479Q96M42 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LINC00479Q96M42 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00479Q96M42 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00479Q96M42 AL592293.1-201ENST00000502889 1188 ntBASIC16.88■□□□□ 0.29
LINC00479Q96M42 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
LINC00479Q96M42 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC00479Q96M42 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LINC00479Q96M42 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LINC00479Q96M42 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LINC00479Q96M42 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LINC00479Q96M42 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00479Q96M42 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LINC00479Q96M42 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00479Q96M42 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00479Q96M42 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC00479Q96M42 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LINC00479Q96M42 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC00479Q96M42 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC00479Q96M42 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.87■□□□□ 0.29
LINC00479Q96M42 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
LINC00479Q96M42 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00479Q96M42 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00479Q96M42 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.87■□□□□ 0.29
LINC00479Q96M42 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC00479Q96M42 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00479Q96M42 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00479Q96M42 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LINC00479Q96M42 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00479Q96M42 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC00479Q96M42 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00479Q96M42 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00479Q96M42 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LINC00479Q96M42 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LINC00479Q96M42 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00479Q96M42 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00479Q96M42 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LINC00479Q96M42 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00479Q96M42 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00479Q96M42 LONRF2P2-201ENST00000439212 571 ntBASIC16.85■□□□□ 0.29
LINC00479Q96M42 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00479Q96M42 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00479Q96M42 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00479Q96M42 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00479Q96M42 FAM99A-202ENST00000538190 1989 ntBASIC16.85■□□□□ 0.29
LINC00479Q96M42 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00479Q96M42 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00479Q96M42 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.85■□□□□ 0.29
LINC00479Q96M42 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00479Q96M42 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LINC00479Q96M42 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00479Q96M42 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00479Q96M42 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
LINC00479Q96M42 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00479Q96M42 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00479Q96M42 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LINC00479Q96M42 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00479Q96M42 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
LINC00479Q96M42 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00479Q96M42 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00479Q96M42 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00479Q96M42 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00479Q96M42 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00479Q96M42 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00479Q96M42 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
LINC00479Q96M42 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LINC00479Q96M42 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00479Q96M42 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC00479Q96M42 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00479Q96M42 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC00479Q96M42 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC00479Q96M42 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC00479Q96M42 AC005229.4-201ENST00000610085 2198 ntBASIC16.83■□□□□ 0.28
LINC00479Q96M42 MIR6765-201ENST00000614092 87 ntBASIC16.83■□□□□ 0.28
LINC00479Q96M42 AC011551.1-201ENST00000614101 683 ntBASIC16.83■□□□□ 0.28
LINC00479Q96M42 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms