Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CALR3Q96L12 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CALR3Q96L12 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.4■■□□□ 1.34
CALR3Q96L12 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.4■■□□□ 1.34
CALR3Q96L12 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CALR3Q96L12 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CALR3Q96L12 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
CALR3Q96L12 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.4■■□□□ 1.34
CALR3Q96L12 AC087742.1-201ENST00000575880 1738 ntBASIC23.39■■□□□ 1.34
CALR3Q96L12 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
CALR3Q96L12 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CALR3Q96L12 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
CALR3Q96L12 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CALR3Q96L12 AC009086.3-201ENST00000623486 1008 ntBASIC23.39■■□□□ 1.33
CALR3Q96L12 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CALR3Q96L12 AC021242.3-201ENST00000607598 1377 ntBASIC23.39■■□□□ 1.33
CALR3Q96L12 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CALR3Q96L12 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CALR3Q96L12 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CALR3Q96L12 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.38■■□□□ 1.33
CALR3Q96L12 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CALR3Q96L12 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CALR3Q96L12 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CALR3Q96L12 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.38■■□□□ 1.33
CALR3Q96L12 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.38■■□□□ 1.33
CALR3Q96L12 DUX4L4-201ENST00000566884 1269 ntBASIC23.38■■□□□ 1.33
CALR3Q96L12 AL031848.2-201ENST00000607670 837 ntBASIC23.38■■□□□ 1.33
CALR3Q96L12 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CALR3Q96L12 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CALR3Q96L12 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.38■■□□□ 1.33
CALR3Q96L12 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CALR3Q96L12 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CALR3Q96L12 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CALR3Q96L12 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
CALR3Q96L12 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CALR3Q96L12 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CALR3Q96L12 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CALR3Q96L12 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CALR3Q96L12 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.37■■□□□ 1.33
CALR3Q96L12 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CALR3Q96L12 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CALR3Q96L12 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.37■■□□□ 1.33
CALR3Q96L12 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CALR3Q96L12 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CALR3Q96L12 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CALR3Q96L12 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CALR3Q96L12 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CALR3Q96L12 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CALR3Q96L12 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.36■■□□□ 1.33
CALR3Q96L12 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CALR3Q96L12 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.36■■□□□ 1.33
CALR3Q96L12 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CALR3Q96L12 C11orf96-202ENST00000528572 1834 ntBASIC23.36■■□□□ 1.33
CALR3Q96L12 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CALR3Q96L12 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CALR3Q96L12 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CALR3Q96L12 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CALR3Q96L12 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CALR3Q96L12 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CALR3Q96L12 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CALR3Q96L12 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.36■■□□□ 1.33
CALR3Q96L12 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CALR3Q96L12 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CALR3Q96L12 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CALR3Q96L12 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CALR3Q96L12 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CALR3Q96L12 AC007375.3-201ENST00000600936 2314 ntBASIC23.35■■□□□ 1.33
CALR3Q96L12 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.35■■□□□ 1.33
CALR3Q96L12 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
CALR3Q96L12 AL033527.3-201ENST00000566366 1196 ntBASIC23.35■■□□□ 1.33
CALR3Q96L12 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.35■■□□□ 1.33
CALR3Q96L12 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CALR3Q96L12 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CALR3Q96L12 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CALR3Q96L12 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.35■■□□□ 1.33
CALR3Q96L12 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.35■■□□□ 1.33
CALR3Q96L12 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CALR3Q96L12 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CALR3Q96L12 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CALR3Q96L12 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CALR3Q96L12 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.34■■□□□ 1.33
CALR3Q96L12 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.34■■□□□ 1.33
CALR3Q96L12 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CALR3Q96L12 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.34■■□□□ 1.33
CALR3Q96L12 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.34■■□□□ 1.33
CALR3Q96L12 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.34■■□□□ 1.33
CALR3Q96L12 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.34■■□□□ 1.33
CALR3Q96L12 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CALR3Q96L12 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CALR3Q96L12 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.34■■□□□ 1.33
CALR3Q96L12 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CALR3Q96L12 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CALR3Q96L12 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CALR3Q96L12 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CALR3Q96L12 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CALR3Q96L12 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CALR3Q96L12 BX664725.1-201ENST00000438252 379 ntBASIC23.33■■□□□ 1.33
CALR3Q96L12 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
CALR3Q96L12 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.33■■□□□ 1.33
CALR3Q96L12 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms