Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.27■■□□□ 1
UBE2E3Q969T4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.27■■□□□ 1
UBE2E3Q969T4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.27■■□□□ 1
UBE2E3Q969T4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.27■■□□□ 1
UBE2E3Q969T4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
UBE2E3Q969T4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
UBE2E3Q969T4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 C1orf229-201ENST00000623686 2258 ntBASIC21.26■□□□□ 0.99
UBE2E3Q969T4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 AL499627.2-201ENST00000606283 725 ntBASIC21.26■□□□□ 0.99
UBE2E3Q969T4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBE2E3Q969T4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2E3Q969T4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2E3Q969T4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.25■□□□□ 0.99
UBE2E3Q969T4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2E3Q969T4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.25■□□□□ 0.99
UBE2E3Q969T4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBE2E3Q969T4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.25■□□□□ 0.99
UBE2E3Q969T4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.24■□□□□ 0.99
UBE2E3Q969T4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 AL512631.2-201ENST00000604634 923 ntBASIC21.23■□□□□ 0.99
UBE2E3Q969T4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.23■□□□□ 0.99
UBE2E3Q969T4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE2E3Q969T4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE2E3Q969T4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
UBE2E3Q969T4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
UBE2E3Q969T4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
UBE2E3Q969T4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
UBE2E3Q969T4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.22■□□□□ 0.99
UBE2E3Q969T4 AC099791.2-201ENST00000605725 427 ntBASIC21.22■□□□□ 0.99
UBE2E3Q969T4 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.22■□□□□ 0.99
UBE2E3Q969T4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.22■□□□□ 0.99
UBE2E3Q969T4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBE2E3Q969T4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBE2E3Q969T4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBE2E3Q969T4 AC233723.2-201ENST00000623798 2106 ntBASIC21.2■□□□□ 0.98
UBE2E3Q969T4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBE2E3Q969T4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.2■□□□□ 0.98
UBE2E3Q969T4 AC004687.1-201ENST00000579003 1625 ntBASIC21.2■□□□□ 0.98
UBE2E3Q969T4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.2■□□□□ 0.98
UBE2E3Q969T4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBE2E3Q969T4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.2■□□□□ 0.98
UBE2E3Q969T4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
UBE2E3Q969T4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.2■□□□□ 0.98
UBE2E3Q969T4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.2■□□□□ 0.98
UBE2E3Q969T4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBE2E3Q969T4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms