Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RAPGEF4Q8WZA2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC29.36■■■□□ 2.29
RAPGEF4Q8WZA2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC29.36■■■□□ 2.29
RAPGEF4Q8WZA2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.36■■■□□ 2.29
RAPGEF4Q8WZA2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC29.35■■■□□ 2.29
RAPGEF4Q8WZA2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC29.35■■■□□ 2.29
RAPGEF4Q8WZA2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC29.35■■■□□ 2.29
RAPGEF4Q8WZA2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC29.35■■■□□ 2.29
RAPGEF4Q8WZA2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RAPGEF4Q8WZA2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.35■■■□□ 2.29
RAPGEF4Q8WZA2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RAPGEF4Q8WZA2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC29.34■■■□□ 2.29
RAPGEF4Q8WZA2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
RAPGEF4Q8WZA2 ID1-201ENST00000376105 1233 ntBASIC29.34■■■□□ 2.29
RAPGEF4Q8WZA2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC29.34■■■□□ 2.29
RAPGEF4Q8WZA2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
RAPGEF4Q8WZA2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.33■■■□□ 2.29
RAPGEF4Q8WZA2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
RAPGEF4Q8WZA2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC29.33■■■□□ 2.29
RAPGEF4Q8WZA2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RAPGEF4Q8WZA2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC29.33■■■□□ 2.29
RAPGEF4Q8WZA2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RAPGEF4Q8WZA2 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.33■■■□□ 2.29
RAPGEF4Q8WZA2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC29.33■■■□□ 2.29
RAPGEF4Q8WZA2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.33■■■□□ 2.29
RAPGEF4Q8WZA2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RAPGEF4Q8WZA2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.32■■■□□ 2.28
RAPGEF4Q8WZA2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RAPGEF4Q8WZA2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RAPGEF4Q8WZA2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.32■■■□□ 2.28
RAPGEF4Q8WZA2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RAPGEF4Q8WZA2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
RAPGEF4Q8WZA2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RAPGEF4Q8WZA2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC29.32■■■□□ 2.28
RAPGEF4Q8WZA2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RAPGEF4Q8WZA2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC29.31■■■□□ 2.28
RAPGEF4Q8WZA2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC29.31■■■□□ 2.28
RAPGEF4Q8WZA2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
RAPGEF4Q8WZA2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RAPGEF4Q8WZA2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF4Q8WZA2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF4Q8WZA2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF4Q8WZA2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC29.29■■■□□ 2.28
RAPGEF4Q8WZA2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC29.29■■■□□ 2.28
RAPGEF4Q8WZA2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC29.29■■■□□ 2.28
RAPGEF4Q8WZA2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF4Q8WZA2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF4Q8WZA2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RAPGEF4Q8WZA2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC29.28■■■□□ 2.28
RAPGEF4Q8WZA2 KRT18P61-201ENST00000585825 1298 ntBASIC29.27■■■□□ 2.28
RAPGEF4Q8WZA2 TPRG1LP1-201ENST00000598702 760 ntBASIC29.27■■■□□ 2.28
RAPGEF4Q8WZA2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
RAPGEF4Q8WZA2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF4Q8WZA2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF4Q8WZA2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF4Q8WZA2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
RAPGEF4Q8WZA2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
RAPGEF4Q8WZA2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC29.26■■■□□ 2.27
RAPGEF4Q8WZA2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF4Q8WZA2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RAPGEF4Q8WZA2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC29.26■■■□□ 2.27
RAPGEF4Q8WZA2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
RAPGEF4Q8WZA2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC29.25■■■□□ 2.27
RAPGEF4Q8WZA2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RAPGEF4Q8WZA2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC29.25■■■□□ 2.27
RAPGEF4Q8WZA2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC29.25■■■□□ 2.27
RAPGEF4Q8WZA2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
RAPGEF4Q8WZA2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC29.24■■■□□ 2.27
RAPGEF4Q8WZA2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
RAPGEF4Q8WZA2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC29.24■■■□□ 2.27
RAPGEF4Q8WZA2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC29.24■■■□□ 2.27
RAPGEF4Q8WZA2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RAPGEF4Q8WZA2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RAPGEF4Q8WZA2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms