Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SVIPQ8NHG7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SVIPQ8NHG7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 AC092053.2-201ENST00000640557 1818 ntBASIC14.04□□□□□ -0.16
SVIPQ8NHG7 AL136379.1-201ENST00000623471 2642 ntBASIC14.04□□□□□ -0.16
SVIPQ8NHG7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 SLC6A10P-202ENST00000431994 2058 ntBASIC14.04□□□□□ -0.16
SVIPQ8NHG7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 AC103702.1-201ENST00000548801 2630 ntBASIC14.04□□□□□ -0.16
SVIPQ8NHG7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 PCDHA1-201ENST00000378133 2726 ntBASIC14.04□□□□□ -0.16
SVIPQ8NHG7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SVIPQ8NHG7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SVIPQ8NHG7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SVIPQ8NHG7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SVIPQ8NHG7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SVIPQ8NHG7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SVIPQ8NHG7 AC091060.1-201ENST00000623524 1766 ntBASIC14.02□□□□□ -0.16
SVIPQ8NHG7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 AC100803.2-201ENST00000562459 1963 ntBASIC14.02□□□□□ -0.17
SVIPQ8NHG7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SVIPQ8NHG7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SVIPQ8NHG7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms