Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 RAP2CP1-201ENST00000605103 478 ntBASIC6.77□□□□□ -1.33
SYNE1Q8NF91 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 AL499627.2-201ENST00000606283 725 ntBASIC6.77□□□□□ -1.33
SYNE1Q8NF91 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SYNE1Q8NF91 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 AC123595.1-201ENST00000440769 1046 ntBASIC6.76□□□□□ -1.33
SYNE1Q8NF91 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 AL137784.2-201ENST00000607332 1000 ntBASIC6.76□□□□□ -1.33
SYNE1Q8NF91 RAB43-208ENST00000615093 783 ntTSL 5 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SYNE1Q8NF91 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 HES6-206ENST00000409574 738 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 IGHV3-19-201ENST00000521488 291 ntBASIC6.75□□□□□ -1.33
SYNE1Q8NF91 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 AC020928.2-201ENST00000588717 2197 ntBASIC6.75□□□□□ -1.33
SYNE1Q8NF91 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 AC145676.1-201ENST00000514988 2004 ntBASIC6.75□□□□□ -1.33
SYNE1Q8NF91 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SYNE1Q8NF91 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms