Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK2A3Q8NEV1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK2A3Q8NEV1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK2A3Q8NEV1 AL353803.4-201ENST00000565882 1934 ntBASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 MIR6724-1-201ENST00000616420 92 ntBASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 MIR6724-2-201ENST00000616483 92 ntBASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 MIR6724-4-201ENST00000617390 92 ntBASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 MIR6724-3-201ENST00000622482 92 ntBASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 C1orf229-201ENST00000623686 2258 ntBASIC19.21■□□□□ 0.67
CSNK2A3Q8NEV1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK2A3Q8NEV1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK2A3Q8NEV1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK2A3Q8NEV1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK2A3Q8NEV1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CSNK2A3Q8NEV1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CSNK2A3Q8NEV1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK2A3Q8NEV1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK2A3Q8NEV1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.2■□□□□ 0.66
CSNK2A3Q8NEV1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 UNC93B8-201ENST00000511903 705 ntBASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK2A3Q8NEV1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 LINC01529-204ENST00000636474 1715 ntBASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 KRT16P3-201ENST00000439127 1283 ntBASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK2A3Q8NEV1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK2A3Q8NEV1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 LINC00565-201ENST00000562710 2331 ntBASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CSNK2A3Q8NEV1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK2A3Q8NEV1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK2A3Q8NEV1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CSNK2A3Q8NEV1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK2A3Q8NEV1 AC009102.2-201ENST00000606772 1639 ntBASIC19.15■□□□□ 0.66
CSNK2A3Q8NEV1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK2A3Q8NEV1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK2A3Q8NEV1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms