Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAAF1Q8NEP3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNAAF1Q8NEP3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.41■□□□□ 0.7
DNAAF1Q8NEP3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAAF1Q8NEP3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAAF1Q8NEP3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
DNAAF1Q8NEP3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAAF1Q8NEP3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNAAF1Q8NEP3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNAAF1Q8NEP3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 AL137060.1-201ENST00000618151 2648 ntBASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNAAF1Q8NEP3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
DNAAF1Q8NEP3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DNAAF1Q8NEP3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DNAAF1Q8NEP3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
DNAAF1Q8NEP3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.39■□□□□ 0.69
DNAAF1Q8NEP3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
DNAAF1Q8NEP3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNAAF1Q8NEP3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNAAF1Q8NEP3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.39■□□□□ 0.69
DNAAF1Q8NEP3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNAAF1Q8NEP3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNAAF1Q8NEP3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DNAAF1Q8NEP3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DNAAF1Q8NEP3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DNAAF1Q8NEP3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 AL353803.4-201ENST00000565882 1934 ntBASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.37■□□□□ 0.69
DNAAF1Q8NEP3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 AC139530.1-201ENST00000575312 1977 ntBASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNAAF1Q8NEP3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
DNAAF1Q8NEP3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 AL033527.3-201ENST00000566366 1196 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms