Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.21■■□□□ 1.31
SMRP1Q8NCR6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMRP1Q8NCR6 TSPY20P-201ENST00000450910 630 ntBASIC23.21■■□□□ 1.31
SMRP1Q8NCR6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMRP1Q8NCR6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.21■■□□□ 1.31
SMRP1Q8NCR6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMRP1Q8NCR6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.2■■□□□ 1.3
SMRP1Q8NCR6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMRP1Q8NCR6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMRP1Q8NCR6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SMRP1Q8NCR6 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.2■■□□□ 1.3
SMRP1Q8NCR6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
SMRP1Q8NCR6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.2■■□□□ 1.3
SMRP1Q8NCR6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.2■■□□□ 1.3
SMRP1Q8NCR6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMRP1Q8NCR6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMRP1Q8NCR6 LINC01529-204ENST00000636474 1715 ntBASIC23.19■■□□□ 1.3
SMRP1Q8NCR6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.19■■□□□ 1.3
SMRP1Q8NCR6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
SMRP1Q8NCR6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.19■■□□□ 1.3
SMRP1Q8NCR6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.19■■□□□ 1.3
SMRP1Q8NCR6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMRP1Q8NCR6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMRP1Q8NCR6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMRP1Q8NCR6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMRP1Q8NCR6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMRP1Q8NCR6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMRP1Q8NCR6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMRP1Q8NCR6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.18■■□□□ 1.3
SMRP1Q8NCR6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.18■■□□□ 1.3
SMRP1Q8NCR6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SMRP1Q8NCR6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMRP1Q8NCR6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMRP1Q8NCR6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 AC144652.1-201ENST00000609974 1624 ntBASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMRP1Q8NCR6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SMRP1Q8NCR6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SMRP1Q8NCR6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SMRP1Q8NCR6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.14■■□□□ 1.29
SMRP1Q8NCR6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.14■■□□□ 1.29
SMRP1Q8NCR6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SMRP1Q8NCR6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMRP1Q8NCR6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.13■■□□□ 1.29
SMRP1Q8NCR6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMRP1Q8NCR6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMRP1Q8NCR6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMRP1Q8NCR6 KRT18P6-201ENST00000555540 1265 ntBASIC23.12■■□□□ 1.29
SMRP1Q8NCR6 AL121832.2-201ENST00000610979 668 ntBASIC23.12■■□□□ 1.29
SMRP1Q8NCR6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMRP1Q8NCR6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMRP1Q8NCR6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.11■■□□□ 1.29
SMRP1Q8NCR6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMRP1Q8NCR6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SMRP1Q8NCR6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.11■■□□□ 1.29
SMRP1Q8NCR6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.11■■□□□ 1.29
SMRP1Q8NCR6 MFSD11-216ENST00000590393 1141 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms