Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.66■■□□□ 1.7
PRPF38AQ8NAV1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PRPF38AQ8NAV1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PRPF38AQ8NAV1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
PRPF38AQ8NAV1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.66■■□□□ 1.7
PRPF38AQ8NAV1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.66■■□□□ 1.7
PRPF38AQ8NAV1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PRPF38AQ8NAV1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 AC123595.1-201ENST00000440769 1046 ntBASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 ABCB10P4-201ENST00000566803 2184 ntBASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PRPF38AQ8NAV1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PRPF38AQ8NAV1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PRPF38AQ8NAV1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.64■■□□□ 1.7
PRPF38AQ8NAV1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
PRPF38AQ8NAV1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.64■■□□□ 1.7
PRPF38AQ8NAV1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.64■■□□□ 1.7
PRPF38AQ8NAV1 AL031602.1-201ENST00000633169 911 ntBASIC25.64■■□□□ 1.7
PRPF38AQ8NAV1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.64■■□□□ 1.69
PRPF38AQ8NAV1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PRPF38AQ8NAV1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PRPF38AQ8NAV1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.64■■□□□ 1.69
PRPF38AQ8NAV1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.63■■□□□ 1.69
PRPF38AQ8NAV1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.63■■□□□ 1.69
PRPF38AQ8NAV1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PRPF38AQ8NAV1 MIR6084-201ENST00000622012 110 ntBASIC25.63■■□□□ 1.69
PRPF38AQ8NAV1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
PRPF38AQ8NAV1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.63■■□□□ 1.69
PRPF38AQ8NAV1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PRPF38AQ8NAV1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PRPF38AQ8NAV1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.62■■□□□ 1.69
PRPF38AQ8NAV1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PRPF38AQ8NAV1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PRPF38AQ8NAV1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.62■■□□□ 1.69
PRPF38AQ8NAV1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PRPF38AQ8NAV1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
PRPF38AQ8NAV1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
PRPF38AQ8NAV1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.62■■□□□ 1.69
PRPF38AQ8NAV1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PRPF38AQ8NAV1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.61■■□□□ 1.69
PRPF38AQ8NAV1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PRPF38AQ8NAV1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PRPF38AQ8NAV1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.61■■□□□ 1.69
PRPF38AQ8NAV1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.61■■□□□ 1.69
PRPF38AQ8NAV1 AC093323.1-202ENST00000635031 2045 ntBASIC25.61■■□□□ 1.69
PRPF38AQ8NAV1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PRPF38AQ8NAV1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PRPF38AQ8NAV1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 AL353803.4-201ENST00000565882 1934 ntBASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PRPF38AQ8NAV1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PRPF38AQ8NAV1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PRPF38AQ8NAV1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PRPF38AQ8NAV1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.59■■□□□ 1.69
PRPF38AQ8NAV1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PRPF38AQ8NAV1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PRPF38AQ8NAV1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 DUX4L2-201ENST00000561772 1275 ntBASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 DUX4L6-201ENST00000626483 1275 ntBASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 DUX4L1-201ENST00000627662 1275 ntBASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 DUX4L8-201ENST00000629013 1275 ntBASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 DUX4L3-201ENST00000630187 1275 ntBASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 DUX4L7-201ENST00000630678 1275 ntBASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 DUX4L5-201ENST00000630834 1275 ntBASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PRPF38AQ8NAV1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.58■■□□□ 1.68
PRPF38AQ8NAV1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.58■■□□□ 1.68
PRPF38AQ8NAV1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PRPF38AQ8NAV1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRPF38AQ8NAV1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
PRPF38AQ8NAV1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.57■■□□□ 1.68
PRPF38AQ8NAV1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PRPF38AQ8NAV1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.57■■□□□ 1.68
PRPF38AQ8NAV1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.57■■□□□ 1.68
PRPF38AQ8NAV1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRPF38AQ8NAV1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms