Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 pRNA.6-201ENST00000610482 90 ntBASIC22.69■■□□□ 1.22
ATPAF2Q8N5M1 pRNA.5-201ENST00000612139 90 ntBASIC22.69■■□□□ 1.22
ATPAF2Q8N5M1 pRNA.11-201ENST00000618423 90 ntBASIC22.69■■□□□ 1.22
ATPAF2Q8N5M1 pRNA.13-201ENST00000619112 90 ntBASIC22.69■■□□□ 1.22
ATPAF2Q8N5M1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 AC008406.3-201ENST00000620001 1374 ntBASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATPAF2Q8N5M1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 AC004687.1-201ENST00000579003 1625 ntBASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATPAF2Q8N5M1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATPAF2Q8N5M1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATPAF2Q8N5M1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ATPAF2Q8N5M1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ATPAF2Q8N5M1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.65■■□□□ 1.22
ATPAF2Q8N5M1 SYT6-210ENST00000641643 1587 ntBASIC22.65■■□□□ 1.22
ATPAF2Q8N5M1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATPAF2Q8N5M1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ATPAF2Q8N5M1 DUX4L19-201ENST00000557448 1267 ntBASIC22.65■■□□□ 1.22
ATPAF2Q8N5M1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
ATPAF2Q8N5M1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ATPAF2Q8N5M1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ATPAF2Q8N5M1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATPAF2Q8N5M1 C1orf229-201ENST00000623686 2258 ntBASIC22.64■■□□□ 1.22
ATPAF2Q8N5M1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.64■■□□□ 1.21
ATPAF2Q8N5M1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATPAF2Q8N5M1 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.64■■□□□ 1.21
ATPAF2Q8N5M1 MIR3181-201ENST00000578512 73 ntBASIC22.64■■□□□ 1.21
ATPAF2Q8N5M1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.64■■□□□ 1.21
ATPAF2Q8N5M1 AC133561.1-201ENST00000568600 2415 ntBASIC22.64■■□□□ 1.21
ATPAF2Q8N5M1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATPAF2Q8N5M1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATPAF2Q8N5M1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ATPAF2Q8N5M1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.64■■□□□ 1.21
ATPAF2Q8N5M1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 AC133637.1-201ENST00000624115 1537 ntBASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 AC012676.1-201ENST00000574705 1949 ntBASIC22.63■■□□□ 1.21
ATPAF2Q8N5M1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
ATPAF2Q8N5M1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATPAF2Q8N5M1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATPAF2Q8N5M1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATPAF2Q8N5M1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ATPAF2Q8N5M1 SERBP1P1-201ENST00000396021 1160 ntBASIC22.61■■□□□ 1.21
ATPAF2Q8N5M1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
ATPAF2Q8N5M1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms