Protein–RNA interactions for Protein: Q8N5H7

SH2D3C, SH2 domain-containing protein 3C, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3CQ8N5H7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D3CQ8N5H7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH2D3CQ8N5H7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SH2D3CQ8N5H7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SH2D3CQ8N5H7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SH2D3CQ8N5H7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SH2D3CQ8N5H7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH2D3CQ8N5H7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.33■■□□□ 1.33
SH2D3CQ8N5H7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH2D3CQ8N5H7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SH2D3CQ8N5H7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SH2D3CQ8N5H7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
SH2D3CQ8N5H7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SH2D3CQ8N5H7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
SH2D3CQ8N5H7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 AL161729.1-201ENST00000604104 1402 ntBASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 AC005703.6-201ENST00000623265 1329 ntBASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D3CQ8N5H7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 AC092068.2-201ENST00000590491 1708 ntBASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 AL512631.2-201ENST00000604634 923 ntBASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D3CQ8N5H7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D3CQ8N5H7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SH2D3CQ8N5H7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 MIR4466-201ENST00000606121 54 ntBASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D3CQ8N5H7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms