Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS52Q8N1B4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 AC027612.3-201ENST00000413684 1047 ntBASIC23.92■■□□□ 1.42
VPS52Q8N1B4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 DUX4L2-201ENST00000561772 1275 ntBASIC23.92■■□□□ 1.42
VPS52Q8N1B4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 MIR6084-201ENST00000622012 110 ntBASIC23.92■■□□□ 1.42
VPS52Q8N1B4 DUX4L6-201ENST00000626483 1275 ntBASIC23.92■■□□□ 1.42
VPS52Q8N1B4 DUX4L1-201ENST00000627662 1275 ntBASIC23.92■■□□□ 1.42
VPS52Q8N1B4 DUX4L8-201ENST00000629013 1275 ntBASIC23.92■■□□□ 1.42
VPS52Q8N1B4 DUX4L3-201ENST00000630187 1275 ntBASIC23.92■■□□□ 1.42
VPS52Q8N1B4 DUX4L7-201ENST00000630678 1275 ntBASIC23.92■■□□□ 1.42
VPS52Q8N1B4 DUX4L5-201ENST00000630834 1275 ntBASIC23.92■■□□□ 1.42
VPS52Q8N1B4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
VPS52Q8N1B4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.91■■□□□ 1.42
VPS52Q8N1B4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
VPS52Q8N1B4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.9■■□□□ 1.42
VPS52Q8N1B4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS52Q8N1B4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.9■■□□□ 1.42
VPS52Q8N1B4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
VPS52Q8N1B4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.9■■□□□ 1.42
VPS52Q8N1B4 AL499627.2-201ENST00000606283 725 ntBASIC23.9■■□□□ 1.42
VPS52Q8N1B4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
VPS52Q8N1B4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS52Q8N1B4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS52Q8N1B4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS52Q8N1B4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
VPS52Q8N1B4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
VPS52Q8N1B4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
VPS52Q8N1B4 AC123595.1-201ENST00000440769 1046 ntBASIC23.89■■□□□ 1.41
VPS52Q8N1B4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.89■■□□□ 1.41
VPS52Q8N1B4 AC012414.1-201ENST00000556676 535 ntBASIC23.89■■□□□ 1.41
VPS52Q8N1B4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.89■■□□□ 1.41
VPS52Q8N1B4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.89■■□□□ 1.41
VPS52Q8N1B4 RARRES2P11-201ENST00000635158 484 ntBASIC23.89■■□□□ 1.41
VPS52Q8N1B4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
VPS52Q8N1B4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
VPS52Q8N1B4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
VPS52Q8N1B4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.89■■□□□ 1.41
VPS52Q8N1B4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
VPS52Q8N1B4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 AC010525.1-201ENST00000585559 441 ntBASIC23.88■■□□□ 1.41
VPS52Q8N1B4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
VPS52Q8N1B4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 AC090192.1-201ENST00000517740 490 ntBASIC23.87■■□□□ 1.41
VPS52Q8N1B4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 AL354811.1-201ENST00000610286 706 ntBASIC23.87■■□□□ 1.41
VPS52Q8N1B4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
VPS52Q8N1B4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms