Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DHX40Q8IX18 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.67■■□□□ 1.54
DHX40Q8IX18 AC010980.1-201ENST00000587192 1142 ntBASIC24.67■■□□□ 1.54
DHX40Q8IX18 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.67■■□□□ 1.54
DHX40Q8IX18 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
DHX40Q8IX18 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DHX40Q8IX18 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DHX40Q8IX18 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DHX40Q8IX18 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DHX40Q8IX18 AC144652.1-201ENST00000609974 1624 ntBASIC24.66■■□□□ 1.54
DHX40Q8IX18 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DHX40Q8IX18 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DHX40Q8IX18 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DHX40Q8IX18 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DHX40Q8IX18 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.66■■□□□ 1.54
DHX40Q8IX18 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DHX40Q8IX18 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
DHX40Q8IX18 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
DHX40Q8IX18 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.65■■□□□ 1.54
DHX40Q8IX18 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
DHX40Q8IX18 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.65■■□□□ 1.54
DHX40Q8IX18 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DHX40Q8IX18 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
DHX40Q8IX18 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DHX40Q8IX18 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.64■■□□□ 1.54
DHX40Q8IX18 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
DHX40Q8IX18 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
DHX40Q8IX18 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
DHX40Q8IX18 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
DHX40Q8IX18 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.64■■□□□ 1.53
DHX40Q8IX18 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.64■■□□□ 1.53
DHX40Q8IX18 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DHX40Q8IX18 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DHX40Q8IX18 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.63■■□□□ 1.53
DHX40Q8IX18 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DHX40Q8IX18 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DHX40Q8IX18 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
DHX40Q8IX18 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.63■■□□□ 1.53
DHX40Q8IX18 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DHX40Q8IX18 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.63■■□□□ 1.53
DHX40Q8IX18 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
DHX40Q8IX18 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.63■■□□□ 1.53
DHX40Q8IX18 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
DHX40Q8IX18 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
DHX40Q8IX18 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.63■■□□□ 1.53
DHX40Q8IX18 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DHX40Q8IX18 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
DHX40Q8IX18 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DHX40Q8IX18 AC026310.3-201ENST00000625186 2373 ntBASIC24.62■■□□□ 1.53
DHX40Q8IX18 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.62■■□□□ 1.53
DHX40Q8IX18 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.62■■□□□ 1.53
DHX40Q8IX18 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DHX40Q8IX18 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
DHX40Q8IX18 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.61■■□□□ 1.53
DHX40Q8IX18 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DHX40Q8IX18 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
DHX40Q8IX18 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DHX40Q8IX18 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DHX40Q8IX18 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DHX40Q8IX18 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DHX40Q8IX18 KRT8P33-201ENST00000508125 1423 ntBASIC24.61■■□□□ 1.53
DHX40Q8IX18 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
DHX40Q8IX18 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DHX40Q8IX18 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.6■■□□□ 1.53
DHX40Q8IX18 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.6■■□□□ 1.53
DHX40Q8IX18 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.6■■□□□ 1.53
DHX40Q8IX18 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.6■■□□□ 1.53
DHX40Q8IX18 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.6■■□□□ 1.53
DHX40Q8IX18 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.6■■□□□ 1.53
DHX40Q8IX18 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.6■■□□□ 1.53
DHX40Q8IX18 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.6■■□□□ 1.53
DHX40Q8IX18 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DHX40Q8IX18 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.6■■□□□ 1.53
DHX40Q8IX18 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DHX40Q8IX18 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
DHX40Q8IX18 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
DHX40Q8IX18 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DHX40Q8IX18 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
DHX40Q8IX18 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
DHX40Q8IX18 AC074183.2-201ENST00000623112 922 ntBASIC24.59■■□□□ 1.53
DHX40Q8IX18 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DHX40Q8IX18 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DHX40Q8IX18 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DHX40Q8IX18 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
DHX40Q8IX18 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DHX40Q8IX18 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
DHX40Q8IX18 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
DHX40Q8IX18 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.58■■□□□ 1.53
DHX40Q8IX18 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.58■■□□□ 1.53
DHX40Q8IX18 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.58■■□□□ 1.53
DHX40Q8IX18 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
DHX40Q8IX18 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.58■■□□□ 1.52
DHX40Q8IX18 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DHX40Q8IX18 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DHX40Q8IX18 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.57■■□□□ 1.52
DHX40Q8IX18 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.57■■□□□ 1.52
DHX40Q8IX18 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.57■■□□□ 1.52
DHX40Q8IX18 SNX5-217ENST00000606557 1087 ntBASIC24.57■■□□□ 1.52
DHX40Q8IX18 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.57■■□□□ 1.52
DHX40Q8IX18 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms