Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SFTPA1Q8IWL2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.6■■□□□ 1.21
SFTPA1Q8IWL2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 AL137784.2-201ENST00000607332 1000 ntBASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.59■■□□□ 1.21
SFTPA1Q8IWL2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 AP005435.1-201ENST00000529293 1178 ntBASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 KRT18P14-201ENST00000534205 1250 ntBASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 TERF1P2-201ENST00000583350 1212 ntBASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SFTPA1Q8IWL2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.58■■□□□ 1.2
SFTPA1Q8IWL2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.58■■□□□ 1.2
SFTPA1Q8IWL2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
SFTPA1Q8IWL2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SFTPA1Q8IWL2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SFTPA1Q8IWL2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.58■■□□□ 1.2
SFTPA1Q8IWL2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 AC004687.1-201ENST00000579003 1625 ntBASIC22.57■■□□□ 1.2
SFTPA1Q8IWL2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SFTPA1Q8IWL2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SFTPA1Q8IWL2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.56■■□□□ 1.2
SFTPA1Q8IWL2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SFTPA1Q8IWL2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.56■■□□□ 1.2
SFTPA1Q8IWL2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.56■■□□□ 1.2
SFTPA1Q8IWL2 NTF6G-201ENST00000591094 616 ntBASIC22.56■■□□□ 1.2
SFTPA1Q8IWL2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SFTPA1Q8IWL2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SFTPA1Q8IWL2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SFTPA1Q8IWL2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 AC004911.1-201ENST00000416316 871 ntBASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 KRT18P61-201ENST00000585825 1298 ntBASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 AC105233.4-201ENST00000642045 216 ntBASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SFTPA1Q8IWL2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SFTPA1Q8IWL2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.54■■□□□ 1.2
SFTPA1Q8IWL2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.54■■□□□ 1.2
SFTPA1Q8IWL2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SFTPA1Q8IWL2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.54■■□□□ 1.2
SFTPA1Q8IWL2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SFTPA1Q8IWL2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SFTPA1Q8IWL2 LINC02228-203ENST00000641970 1355 ntBASIC22.53■■□□□ 1.2
SFTPA1Q8IWL2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.53■■□□□ 1.2
SFTPA1Q8IWL2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SFTPA1Q8IWL2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.53■■□□□ 1.2
SFTPA1Q8IWL2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.53■■□□□ 1.2
SFTPA1Q8IWL2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SFTPA1Q8IWL2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SFTPA1Q8IWL2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SFTPA1Q8IWL2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SFTPA1Q8IWL2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 AL353803.4-201ENST00000565882 1934 ntBASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SFTPA1Q8IWL2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
SFTPA1Q8IWL2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms