Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.19■□□□□ 0.34
NDUFA11Q86Y39 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA11Q86Y39 LINC02228-203ENST00000641970 1355 ntBASIC17.18■□□□□ 0.34
NDUFA11Q86Y39 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA11Q86Y39 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.18■□□□□ 0.34
NDUFA11Q86Y39 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA11Q86Y39 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA11Q86Y39 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.18■□□□□ 0.34
NDUFA11Q86Y39 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.18■□□□□ 0.34
NDUFA11Q86Y39 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NDUFA11Q86Y39 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA11Q86Y39 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 CCDC92B-201ENST00000575506 885 ntBASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA11Q86Y39 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 RARRES2P11-201ENST00000635158 484 ntBASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA11Q86Y39 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 AC138932.3-201ENST00000567634 1902 ntBASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 KRT18P14-201ENST00000534205 1250 ntBASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 IKBKGP1-201ENST00000612193 1073 ntBASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 AC105233.4-201ENST00000642045 216 ntBASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA11Q86Y39 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 AC090192.1-201ENST00000517740 490 ntBASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms