Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ZC3HC1Q86WB0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ZC3HC1Q86WB0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.05■■□□□ 1.12
ZC3HC1Q86WB0 DUX4L4-201ENST00000566884 1269 ntBASIC22.05■■□□□ 1.12
ZC3HC1Q86WB0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
ZC3HC1Q86WB0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ZC3HC1Q86WB0 AC009102.2-201ENST00000606772 1639 ntBASIC22.05■■□□□ 1.12
ZC3HC1Q86WB0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
ZC3HC1Q86WB0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 AC239859.2-201ENST00000444165 318 ntBASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
ZC3HC1Q86WB0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 AC080038.3-201ENST00000623346 1952 ntBASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 AC009299.2-201ENST00000482477 511 ntBASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZC3HC1Q86WB0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3HC1Q86WB0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3HC1Q86WB0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
ZC3HC1Q86WB0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
ZC3HC1Q86WB0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3HC1Q86WB0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
ZC3HC1Q86WB0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.02■■□□□ 1.12
ZC3HC1Q86WB0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZC3HC1Q86WB0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
ZC3HC1Q86WB0 CLDN5-201ENST00000403084 2357 ntBASIC22.02■■□□□ 1.11
ZC3HC1Q86WB0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 AL451085.2-201ENST00000605085 799 ntBASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 AC010997.5-201ENST00000609182 354 ntBASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3HC1Q86WB0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22■■□□□ 1.11
ZC3HC1Q86WB0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3HC1Q86WB0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3HC1Q86WB0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3HC1Q86WB0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3HC1Q86WB0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3HC1Q86WB0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.99■■□□□ 1.11
ZC3HC1Q86WB0 AC009086.3-201ENST00000623486 1008 ntBASIC21.99■■□□□ 1.11
ZC3HC1Q86WB0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3HC1Q86WB0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3HC1Q86WB0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3HC1Q86WB0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 TSPY9P-201ENST00000440215 945 ntBASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 TSPY11P-201ENST00000442607 1045 ntBASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
ZC3HC1Q86WB0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms