Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
USP31Q70CQ4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC30.11■■■□□ 2.41
USP31Q70CQ4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC30.11■■■□□ 2.41
USP31Q70CQ4 NTF6G-201ENST00000591094 616 ntBASIC30.11■■■□□ 2.41
USP31Q70CQ4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
USP31Q70CQ4 AC105233.4-201ENST00000642045 216 ntBASIC30.11■■■□□ 2.41
USP31Q70CQ4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
USP31Q70CQ4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC30.11■■■□□ 2.41
USP31Q70CQ4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC30.11■■■□□ 2.41
USP31Q70CQ4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
USP31Q70CQ4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC30.1■■■□□ 2.41
USP31Q70CQ4 TPRG1LP1-201ENST00000598702 760 ntBASIC30.1■■■□□ 2.41
USP31Q70CQ4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
USP31Q70CQ4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
USP31Q70CQ4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
USP31Q70CQ4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP31Q70CQ4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP31Q70CQ4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
USP31Q70CQ4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC30.09■■■□□ 2.41
USP31Q70CQ4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC30.09■■■□□ 2.41
USP31Q70CQ4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
USP31Q70CQ4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC30.09■■■□□ 2.41
USP31Q70CQ4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC30.09■■■□□ 2.41
USP31Q70CQ4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
USP31Q70CQ4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP31Q70CQ4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP31Q70CQ4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
USP31Q70CQ4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
USP31Q70CQ4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP31Q70CQ4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.08■■■□□ 2.41
USP31Q70CQ4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC30.08■■■□□ 2.41
USP31Q70CQ4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
USP31Q70CQ4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC30.08■■■□□ 2.41
USP31Q70CQ4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP31Q70CQ4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP31Q70CQ4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
USP31Q70CQ4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
USP31Q70CQ4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC30.07■■■□□ 2.4
USP31Q70CQ4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
USP31Q70CQ4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC30.07■■■□□ 2.4
USP31Q70CQ4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC30.07■■■□□ 2.4
USP31Q70CQ4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
USP31Q70CQ4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC30.07■■■□□ 2.4
USP31Q70CQ4 AC079630.1-202ENST00000618127 1840 ntBASIC30.07■■■□□ 2.4
USP31Q70CQ4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
USP31Q70CQ4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC30.06■■■□□ 2.4
USP31Q70CQ4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.06■■■□□ 2.4
USP31Q70CQ4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
USP31Q70CQ4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30.06■■■□□ 2.4
USP31Q70CQ4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
USP31Q70CQ4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC30.06■■■□□ 2.4
USP31Q70CQ4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
USP31Q70CQ4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
USP31Q70CQ4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
USP31Q70CQ4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.05■■■□□ 2.4
USP31Q70CQ4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC30.05■■■□□ 2.4
USP31Q70CQ4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC30.05■■■□□ 2.4
USP31Q70CQ4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30.05■■■□□ 2.4
USP31Q70CQ4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
USP31Q70CQ4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
USP31Q70CQ4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
USP31Q70CQ4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
USP31Q70CQ4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
USP31Q70CQ4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC30.04■■■□□ 2.4
USP31Q70CQ4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC30.04■■■□□ 2.4
USP31Q70CQ4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
USP31Q70CQ4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
USP31Q70CQ4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC30.04■■■□□ 2.4
USP31Q70CQ4 AC004812.2-201ENST00000611079 2094 ntBASIC30.04■■■□□ 2.4
USP31Q70CQ4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
USP31Q70CQ4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
USP31Q70CQ4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
USP31Q70CQ4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
USP31Q70CQ4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC30.03■■■□□ 2.4
USP31Q70CQ4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
USP31Q70CQ4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC30.03■■■□□ 2.4
USP31Q70CQ4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
USP31Q70CQ4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
USP31Q70CQ4 AL139125.2-201ENST00000623134 1869 ntBASIC30.03■■■□□ 2.4
USP31Q70CQ4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
USP31Q70CQ4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.03■■■□□ 2.4
USP31Q70CQ4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
USP31Q70CQ4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
USP31Q70CQ4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC30.03■■■□□ 2.4
USP31Q70CQ4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30.03■■■□□ 2.4
USP31Q70CQ4 AC004911.1-201ENST00000416316 871 ntBASIC30.03■■■□□ 2.4
USP31Q70CQ4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC30.03■■■□□ 2.4
USP31Q70CQ4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
USP31Q70CQ4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
USP31Q70CQ4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC30.03■■■□□ 2.4
USP31Q70CQ4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC30.03■■■□□ 2.4
USP31Q70CQ4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC30.02■■■□□ 2.4
USP31Q70CQ4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC30.02■■■□□ 2.4
USP31Q70CQ4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
USP31Q70CQ4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
USP31Q70CQ4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC30.02■■■□□ 2.4
USP31Q70CQ4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC30.02■■■□□ 2.4
USP31Q70CQ4 LINC01124-201ENST00000409786 2117 ntBASIC30.01■■■□□ 2.39
USP31Q70CQ4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
USP31Q70CQ4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms