Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.16■■□□□ 1.46
CNKSR3Q6P9H4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CNKSR3Q6P9H4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.16■■□□□ 1.46
CNKSR3Q6P9H4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CNKSR3Q6P9H4 AC022211.4-201ENST00000625094 2161 ntBASIC24.15■■□□□ 1.46
CNKSR3Q6P9H4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CNKSR3Q6P9H4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CNKSR3Q6P9H4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CNKSR3Q6P9H4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CNKSR3Q6P9H4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CNKSR3Q6P9H4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CNKSR3Q6P9H4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CNKSR3Q6P9H4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CNKSR3Q6P9H4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CNKSR3Q6P9H4 AP004607.4-201ENST00000530158 1459 ntBASIC24.14■■□□□ 1.46
CNKSR3Q6P9H4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CNKSR3Q6P9H4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CNKSR3Q6P9H4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CNKSR3Q6P9H4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CNKSR3Q6P9H4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CNKSR3Q6P9H4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.14■■□□□ 1.45
CNKSR3Q6P9H4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CNKSR3Q6P9H4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CNKSR3Q6P9H4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CNKSR3Q6P9H4 AC026185.1-201ENST00000445748 174 ntBASIC24.13■■□□□ 1.45
CNKSR3Q6P9H4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.13■■□□□ 1.45
CNKSR3Q6P9H4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.13■■□□□ 1.45
CNKSR3Q6P9H4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CNKSR3Q6P9H4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CNKSR3Q6P9H4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CNKSR3Q6P9H4 AC004854.2-201ENST00000608450 1441 ntBASIC24.12■■□□□ 1.45
CNKSR3Q6P9H4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CNKSR3Q6P9H4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CNKSR3Q6P9H4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CNKSR3Q6P9H4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CNKSR3Q6P9H4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.12■■□□□ 1.45
CNKSR3Q6P9H4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.12■■□□□ 1.45
CNKSR3Q6P9H4 BID-214ENST00000617586 542 ntTSL 5 BASIC24.12■■□□□ 1.45
CNKSR3Q6P9H4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CNKSR3Q6P9H4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CNKSR3Q6P9H4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CNKSR3Q6P9H4 BX005040.4-201ENST00000637145 1518 ntBASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CNKSR3Q6P9H4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.09■■□□□ 1.45
CNKSR3Q6P9H4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CNKSR3Q6P9H4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.09■■□□□ 1.45
CNKSR3Q6P9H4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CNKSR3Q6P9H4 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.09■■□□□ 1.45
CNKSR3Q6P9H4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.09■■□□□ 1.45
CNKSR3Q6P9H4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CNKSR3Q6P9H4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CNKSR3Q6P9H4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CNKSR3Q6P9H4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CNKSR3Q6P9H4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CNKSR3Q6P9H4 KRT19P1-201ENST00000405746 1186 ntBASIC24.08■■□□□ 1.45
CNKSR3Q6P9H4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CNKSR3Q6P9H4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.08■■□□□ 1.45
CNKSR3Q6P9H4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.08■■□□□ 1.45
CNKSR3Q6P9H4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CNKSR3Q6P9H4 AC104771.1-201ENST00000603335 964 ntBASIC24.08■■□□□ 1.45
CNKSR3Q6P9H4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CNKSR3Q6P9H4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CNKSR3Q6P9H4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms