Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF17Q5VTA0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.11■□□□□ 0.97
PRAMEF17Q5VTA0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PRAMEF17Q5VTA0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PRAMEF17Q5VTA0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.11■□□□□ 0.97
PRAMEF17Q5VTA0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF17Q5VTA0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PRAMEF17Q5VTA0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF17Q5VTA0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF17Q5VTA0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PRAMEF17Q5VTA0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 AL353803.4-201ENST00000565882 1934 ntBASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PRAMEF17Q5VTA0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 MIR5787-201ENST00000611784 55 ntBASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 MIR6821-201ENST00000617625 74 ntBASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF17Q5VTA0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 AC097381.1-201ENST00000429019 1296 ntBASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.08■□□□□ 0.97
PRAMEF17Q5VTA0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PRAMEF17Q5VTA0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PRAMEF17Q5VTA0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 OR2I1P-207ENST00000453522 948 ntBASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PRAMEF17Q5VTA0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 IGHV3-19-201ENST00000521488 291 ntBASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PRAMEF17Q5VTA0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 AC004687.1-201ENST00000579003 1625 ntBASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 AC092666.2-201ENST00000613287 246 ntBASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAMEF17Q5VTA0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF17Q5VTA0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF17Q5VTA0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF17Q5VTA0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF17Q5VTA0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.04■□□□□ 0.96
PRAMEF17Q5VTA0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PRAMEF17Q5VTA0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF17Q5VTA0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF17Q5VTA0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PRAMEF17Q5VTA0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF17Q5VTA0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF17Q5VTA0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms