Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNFT1Q5M7Z0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNFT1Q5M7Z0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 AL354811.1-201ENST00000610286 706 ntBASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNFT1Q5M7Z0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNFT1Q5M7Z0 KRT18P5-201ENST00000436075 1291 ntBASIC20.05■□□□□ 0.8
RNFT1Q5M7Z0 AC123595.1-201ENST00000440769 1046 ntBASIC20.05■□□□□ 0.8
RNFT1Q5M7Z0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.05■□□□□ 0.8
RNFT1Q5M7Z0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.05■□□□□ 0.8
RNFT1Q5M7Z0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNFT1Q5M7Z0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RNFT1Q5M7Z0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNFT1Q5M7Z0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNFT1Q5M7Z0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RNFT1Q5M7Z0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.04■□□□□ 0.8
RNFT1Q5M7Z0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 AC004687.1-201ENST00000579003 1625 ntBASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 AL353803.4-201ENST00000565882 1934 ntBASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.03■□□□□ 0.8
RNFT1Q5M7Z0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNFT1Q5M7Z0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNFT1Q5M7Z0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.02■□□□□ 0.8
RNFT1Q5M7Z0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.02■□□□□ 0.8
RNFT1Q5M7Z0 CCDC92B-201ENST00000575506 885 ntBASIC20.02■□□□□ 0.8
RNFT1Q5M7Z0 IKBKGP1-201ENST00000612193 1073 ntBASIC20.02■□□□□ 0.8
RNFT1Q5M7Z0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNFT1Q5M7Z0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNFT1Q5M7Z0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNFT1Q5M7Z0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
RNFT1Q5M7Z0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RNFT1Q5M7Z0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNFT1Q5M7Z0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
RNFT1Q5M7Z0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNFT1Q5M7Z0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNFT1Q5M7Z0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RNFT1Q5M7Z0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNFT1Q5M7Z0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNFT1Q5M7Z0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNFT1Q5M7Z0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNFT1Q5M7Z0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNFT1Q5M7Z0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNFT1Q5M7Z0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNFT1Q5M7Z0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNFT1Q5M7Z0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.01■□□□□ 0.79
RNFT1Q5M7Z0 AC022517.1-201ENST00000592429 346 ntBASIC20.01■□□□□ 0.79
RNFT1Q5M7Z0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNFT1Q5M7Z0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20■□□□□ 0.79
RNFT1Q5M7Z0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.99■□□□□ 0.79
RNFT1Q5M7Z0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms