Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 pRNA.6-201ENST00000610482 90 ntBASIC21.07■□□□□ 0.96
TMEM35AQ53FP2 pRNA.5-201ENST00000612139 90 ntBASIC21.07■□□□□ 0.96
TMEM35AQ53FP2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM35AQ53FP2 pRNA.11-201ENST00000618423 90 ntBASIC21.07■□□□□ 0.96
TMEM35AQ53FP2 pRNA.13-201ENST00000619112 90 ntBASIC21.07■□□□□ 0.96
TMEM35AQ53FP2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEM35AQ53FP2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TMEM35AQ53FP2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM35AQ53FP2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM35AQ53FP2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35AQ53FP2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TMEM35AQ53FP2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM35AQ53FP2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35AQ53FP2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.06■□□□□ 0.96
TMEM35AQ53FP2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.06■□□□□ 0.96
TMEM35AQ53FP2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TMEM35AQ53FP2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35AQ53FP2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TMEM35AQ53FP2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM35AQ53FP2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 ESRRAP2-201ENST00000418437 1549 ntBASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 MIR3181-201ENST00000578512 73 ntBASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM35AQ53FP2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 AC004687.1-201ENST00000579003 1625 ntBASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 AL136116.3-201ENST00000402907 1138 ntBASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 AL138724.1-201ENST00000606771 1088 ntBASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 AC133637.1-201ENST00000624115 1537 ntBASIC21.04■□□□□ 0.96
TMEM35AQ53FP2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 C1orf229-201ENST00000623686 2258 ntBASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM35AQ53FP2 SYT6-210ENST00000641643 1587 ntBASIC21.02■□□□□ 0.96
TMEM35AQ53FP2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35AQ53FP2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TMEM35AQ53FP2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.02■□□□□ 0.96
TMEM35AQ53FP2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35AQ53FP2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TMEM35AQ53FP2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35AQ53FP2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
TMEM35AQ53FP2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM35AQ53FP2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.02■□□□□ 0.95
TMEM35AQ53FP2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
TMEM35AQ53FP2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
TMEM35AQ53FP2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
TMEM35AQ53FP2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TMEM35AQ53FP2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TMEM35AQ53FP2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35AQ53FP2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35AQ53FP2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEM35AQ53FP2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35AQ53FP2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35AQ53FP2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM35AQ53FP2 AC133561.1-201ENST00000568600 2415 ntBASIC21■□□□□ 0.95
TMEM35AQ53FP2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMEM35AQ53FP2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35AQ53FP2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMEM35AQ53FP2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35AQ53FP2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21■□□□□ 0.95
TMEM35AQ53FP2 AC008406.3-201ENST00000620001 1374 ntBASIC21■□□□□ 0.95
TMEM35AQ53FP2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35AQ53FP2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMEM35AQ53FP2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21■□□□□ 0.95
TMEM35AQ53FP2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TMEM35AQ53FP2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM35AQ53FP2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21■□□□□ 0.95
TMEM35AQ53FP2 PTCHD3P2-201ENST00000424937 1205 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms