Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM60Q495X7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.59■■□□□ 1.53
TRIM60Q495X7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM60Q495X7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM60Q495X7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.59■■□□□ 1.53
TRIM60Q495X7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
TRIM60Q495X7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM60Q495X7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
TRIM60Q495X7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.59■■□□□ 1.53
TRIM60Q495X7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
TRIM60Q495X7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM60Q495X7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM60Q495X7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.58■■□□□ 1.53
TRIM60Q495X7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM60Q495X7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.58■■□□□ 1.53
TRIM60Q495X7 KRT19P1-201ENST00000405746 1186 ntBASIC24.58■■□□□ 1.53
TRIM60Q495X7 AC011767.1-201ENST00000617410 1153 ntBASIC24.58■■□□□ 1.53
TRIM60Q495X7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM60Q495X7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
TRIM60Q495X7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM60Q495X7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
TRIM60Q495X7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
TRIM60Q495X7 GPX1P1-201ENST00000388829 606 ntBASIC24.57■■□□□ 1.52
TRIM60Q495X7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM60Q495X7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM60Q495X7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM60Q495X7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM60Q495X7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
TRIM60Q495X7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM60Q495X7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM60Q495X7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM60Q495X7 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.56■■□□□ 1.52
TRIM60Q495X7 TSPY20P-201ENST00000450910 630 ntBASIC24.56■■□□□ 1.52
TRIM60Q495X7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.56■■□□□ 1.52
TRIM60Q495X7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM60Q495X7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.56■■□□□ 1.52
TRIM60Q495X7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM60Q495X7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM60Q495X7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM60Q495X7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM60Q495X7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
TRIM60Q495X7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM60Q495X7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM60Q495X7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM60Q495X7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.55■■□□□ 1.52
TRIM60Q495X7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM60Q495X7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.55■■□□□ 1.52
TRIM60Q495X7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM60Q495X7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
TRIM60Q495X7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM60Q495X7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM60Q495X7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.54■■□□□ 1.52
TRIM60Q495X7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
TRIM60Q495X7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM60Q495X7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.54■■□□□ 1.52
TRIM60Q495X7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM60Q495X7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM60Q495X7 BX005040.4-201ENST00000637145 1518 ntBASIC24.53■■□□□ 1.52
TRIM60Q495X7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM60Q495X7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
TRIM60Q495X7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.53■■□□□ 1.52
TRIM60Q495X7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.53■■□□□ 1.52
TRIM60Q495X7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM60Q495X7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM60Q495X7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM60Q495X7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.52■■□□□ 1.52
TRIM60Q495X7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM60Q495X7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
TRIM60Q495X7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.52■■□□□ 1.52
TRIM60Q495X7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.52■■□□□ 1.52
TRIM60Q495X7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM60Q495X7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM60Q495X7 LINC01529-204ENST00000636474 1715 ntBASIC24.52■■□□□ 1.52
TRIM60Q495X7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
TRIM60Q495X7 AL121749.1-202ENST00000609313 2153 ntBASIC24.52■■□□□ 1.52
TRIM60Q495X7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM60Q495X7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM60Q495X7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM60Q495X7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM60Q495X7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM60Q495X7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM60Q495X7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.51■■□□□ 1.51
TRIM60Q495X7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM60Q495X7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.51■■□□□ 1.51
TRIM60Q495X7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.51■■□□□ 1.51
TRIM60Q495X7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM60Q495X7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM60Q495X7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM60Q495X7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.5■■□□□ 1.51
TRIM60Q495X7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.5■■□□□ 1.51
TRIM60Q495X7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM60Q495X7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM60Q495X7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.5■■□□□ 1.51
TRIM60Q495X7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM60Q495X7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM60Q495X7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM60Q495X7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM60Q495X7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM60Q495X7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM60Q495X7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms