Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.71■■□□□ 1.07
RSPO4Q2I0M5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RSPO4Q2I0M5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RSPO4Q2I0M5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.71■■□□□ 1.07
RSPO4Q2I0M5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
RSPO4Q2I0M5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 AC073210.2-201ENST00000430369 194 ntBASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RSPO4Q2I0M5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RSPO4Q2I0M5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RSPO4Q2I0M5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RSPO4Q2I0M5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RSPO4Q2I0M5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.69■■□□□ 1.06
RSPO4Q2I0M5 RNA5SP413-201ENST00000516373 109 ntBASIC21.69■■□□□ 1.06
RSPO4Q2I0M5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
RSPO4Q2I0M5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RSPO4Q2I0M5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RSPO4Q2I0M5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RSPO4Q2I0M5 AC096887.2-201ENST00000623443 1957 ntBASIC21.68■■□□□ 1.06
RSPO4Q2I0M5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RSPO4Q2I0M5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.68■■□□□ 1.06
RSPO4Q2I0M5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.68■■□□□ 1.06
RSPO4Q2I0M5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.68■■□□□ 1.06
RSPO4Q2I0M5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.68■■□□□ 1.06
RSPO4Q2I0M5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RSPO4Q2I0M5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RSPO4Q2I0M5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RSPO4Q2I0M5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RSPO4Q2I0M5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RSPO4Q2I0M5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 DUSP5P2-201ENST00000426873 1033 ntBASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 AC098590.1-201ENST00000468126 897 ntBASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 AC098934.4-201ENST00000564127 592 ntBASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RSPO4Q2I0M5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RSPO4Q2I0M5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.65■■□□□ 1.06
RSPO4Q2I0M5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RSPO4Q2I0M5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
RSPO4Q2I0M5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.65■■□□□ 1.06
RSPO4Q2I0M5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RSPO4Q2I0M5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RSPO4Q2I0M5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RSPO4Q2I0M5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RSPO4Q2I0M5 DUX4L16-201ENST00000555130 1264 ntBASIC21.64■■□□□ 1.05
RSPO4Q2I0M5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.64■■□□□ 1.05
RSPO4Q2I0M5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.64■■□□□ 1.05
RSPO4Q2I0M5 BX005040.4-201ENST00000637145 1518 ntBASIC21.64■■□□□ 1.05
RSPO4Q2I0M5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RSPO4Q2I0M5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RSPO4Q2I0M5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RSPO4Q2I0M5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RSPO4Q2I0M5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.63■■□□□ 1.05
RSPO4Q2I0M5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RSPO4Q2I0M5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RSPO4Q2I0M5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.63■■□□□ 1.05
RSPO4Q2I0M5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RSPO4Q2I0M5 MIR1224-201ENST00000408193 85 ntBASIC21.63■■□□□ 1.05
RSPO4Q2I0M5 RPS2P4-201ENST00000476944 856 ntBASIC21.63■■□□□ 1.05
RSPO4Q2I0M5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RSPO4Q2I0M5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
RSPO4Q2I0M5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.62■■□□□ 1.05
RSPO4Q2I0M5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RSPO4Q2I0M5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.62■■□□□ 1.05
RSPO4Q2I0M5 AF201337.1-201ENST00000520239 748 ntBASIC21.62■■□□□ 1.05
RSPO4Q2I0M5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms