Protein–RNA interactions for Protein: Q12071

VPS54, Vacuolar protein sorting-associated protein 54, yeastyeast

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS54Q12071 ADD66YKL206C 804 nt4.43□□□□□ -1.7
VPS54Q12071 NSE1YLR007W 1011 nt4.43□□□□□ -1.7
VPS54Q12071 YLR225CYLR225C 1224 nt4.43□□□□□ -1.7
VPS54Q12071 GPI12YMR281W 915 nt4.43□□□□□ -1.7
VPS54Q12071 TOM7YNL070W 183 nt4.43□□□□□ -1.7
VPS54Q12071 VPS28YPL065W 729 nt4.43□□□□□ -1.7
VPS54Q12071 SPN1YPR133C 1233 nt4.43□□□□□ -1.7
VPS54Q12071 TFA1YKL028W 1449 nt4.43□□□□□ -1.7
VPS54Q12071 CUS1YMR240C 1311 nt4.43□□□□□ -1.7
VPS54Q12071 PDR5YOR153W 4536 nt4.42□□□□□ -1.7
VPS54Q12071 NGL3YML118W 1518 nt4.42□□□□□ -1.7
VPS54Q12071 PRR2YDL214C 2100 nt4.42□□□□□ -1.7
VPS54Q12071 AIM7YDR063W 450 nt4.42□□□□□ -1.7
VPS54Q12071 BCP1YDR361C 852 nt4.42□□□□□ -1.7
VPS54Q12071 YGL199CYGL199C 471 nt4.42□□□□□ -1.7
VPS54Q12071 PXR1YGR280C 816 nt4.42□□□□□ -1.7
VPS54Q12071 CDC42YLR229C 576 nt4.42□□□□□ -1.7
VPS54Q12071 YML031C-AYML031C-A 336 nt4.42□□□□□ -1.7
VPS54Q12071 RAD17YOR368W 1206 nt4.42□□□□□ -1.7
VPS54Q12071 NCE102YPR149W 522 nt4.42□□□□□ -1.7
VPS54Q12071 YPR174CYPR174C 666 nt4.42□□□□□ -1.7
VPS54Q12071 SEN1YLR430W 6696 nt4.42□□□□□ -1.7
VPS54Q12071 ALG11YNL048W 1647 nt4.42□□□□□ -1.7
VPS54Q12071 YDR098C-AYDR098C-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YDR210C-CYDR210C-C 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YDR261C-CYDR261C-C 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YDR316W-AYDR316W-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YDR365W-AYDR365W-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YER137C-AYER137C-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YER159C-AYER159C-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YGR027W-AYGR027W-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YGR038C-AYGR038C-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YGR161C-CYGR161C-C 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YJR026WYJR026W 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YJR028WYJR028W 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YAR010CYAR010C 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YLR157C-AYLR157C-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YLR227W-AYLR227W-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YLR256W-AYLR256W-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YML040WYML040W 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YML045W-AYML045W-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YMR051CYMR051C 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YNL054W-AYNL054W-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YOL103W-AYOL103W-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YPL257W-AYPL257W-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YPR137C-AYPR137C-A 1323 nt4.42□□□□□ -1.7
VPS54Q12071 YPR158C-CYPR158C-C 1323 nt4.42□□□□□ -1.7
VPS54Q12071 PRD1YCL057W 2139 nt4.42□□□□□ -1.7
VPS54Q12071 OPT2YPR194C 2634 nt4.41□□□□□ -1.7
VPS54Q12071 YDR056CYDR056C 618 nt4.41□□□□□ -1.7
VPS54Q12071 EDC1YGL222C 528 nt4.41□□□□□ -1.7
VPS54Q12071 SRB5YGR104C 924 nt4.41□□□□□ -1.7
VPS54Q12071 YIL021C-AYIL021C-A 270 nt4.41□□□□□ -1.7
VPS54Q12071 UPS2YLR168C 693 nt4.41□□□□□ -1.7
VPS54Q12071 VPS71YML041C 843 nt4.41□□□□□ -1.7
VPS54Q12071 MPD1YOR288C 957 nt4.41□□□□□ -1.7
VPS54Q12071 SUA7YPR086W 1038 nt4.41□□□□□ -1.7
VPS54Q12071 SAT4YCR008W 1812 nt4.41□□□□□ -1.7
VPS54Q12071 TRM13YOL125W 1431 nt4.4□□□□□ -1.7
VPS54Q12071 DOS2YDR068W 933 nt4.4□□□□□ -1.71
VPS54Q12071 ENT5YDR153C 1236 nt4.4□□□□□ -1.71
VPS54Q12071 YDR282CYDR282C 1245 nt4.4□□□□□ -1.71
VPS54Q12071 BUD25YER014C-A 462 nt4.4□□□□□ -1.71
VPS54Q12071 TYS1YGR185C 1185 nt4.4□□□□□ -1.71
VPS54Q12071 YKL071WYKL071W 771 nt4.4□□□□□ -1.71
VPS54Q12071 TDA5YLR426W 981 nt4.4□□□□□ -1.71
VPS54Q12071 YNL181WYNL181W 1224 nt4.4□□□□□ -1.71
VPS54Q12071 DCS2YOR173W 1062 nt4.4□□□□□ -1.71
VPS54Q12071 FES1YBR101C 873 nt4.4□□□□□ -1.71
VPS54Q12071 TRM11YOL124C 1302 nt4.4□□□□□ -1.71
VPS54Q12071 PUS9YDL036C 1389 nt4.4□□□□□ -1.71
VPS54Q12071 IOC4YMR044W 1428 nt4.39□□□□□ -1.71
VPS54Q12071 SSA2YLL024C 1920 nt4.39□□□□□ -1.71
VPS54Q12071 RPC53YDL150W 1269 nt4.39□□□□□ -1.71
VPS54Q12071 tL(UAG)JtL(UAG)J 82 nt4.39□□□□□ -1.71
VPS54Q12071 tL(UAG)L1tL(UAG)L1 82 nt4.39□□□□□ -1.71
VPS54Q12071 tL(UAG)L2tL(UAG)L2 82 nt4.39□□□□□ -1.71
VPS54Q12071 tQ(UUG)CtQ(UUG)C 72 nt4.39□□□□□ -1.71
VPS54Q12071 tQ(UUG)D1tQ(UUG)D1 72 nt4.39□□□□□ -1.71
VPS54Q12071 tQ(UUG)D2tQ(UUG)D2 72 nt4.39□□□□□ -1.71
VPS54Q12071 tQ(UUG)D3tQ(UUG)D3 72 nt4.39□□□□□ -1.71
VPS54Q12071 tQ(UUG)E1tQ(UUG)E1 72 nt4.39□□□□□ -1.71
VPS54Q12071 tQ(UUG)HtQ(UUG)H 72 nt4.39□□□□□ -1.71
VPS54Q12071 tQ(UUG)LtQ(UUG)L 72 nt4.39□□□□□ -1.71
VPS54Q12071 SFH5YJL145W 885 nt4.39□□□□□ -1.71
VPS54Q12071 RAD27YKL113C 1149 nt4.39□□□□□ -1.71
VPS54Q12071 YNR061CYNR061C 660 nt4.39□□□□□ -1.71
VPS54Q12071 ADP1YCR011C 3150 nt4.39□□□□□ -1.71
VPS54Q12071 PEP5YMR231W 3090 nt4.39□□□□□ -1.71
VPS54Q12071 YPS7YDR349C 1791 nt4.38□□□□□ -1.71
VPS54Q12071 MMT1YMR177W 1533 nt4.38□□□□□ -1.71
VPS54Q12071 GPB1YOR371C 2694 nt4.38□□□□□ -1.71
VPS54Q12071 TMA17YDL110C 453 nt4.38□□□□□ -1.71
VPS54Q12071 RPB7YDR404C 516 nt4.38□□□□□ -1.71
VPS54Q12071 CYM1YDR430C 2970 nt4.38□□□□□ -1.71
VPS54Q12071 EFB1YAL003W 621 nt4.38□□□□□ -1.71
VPS54Q12071 JLP1YLL057C 1239 nt4.38□□□□□ -1.71
VPS54Q12071 YLR462WYLR462W 609 nt4.38□□□□□ -1.71
VPS54Q12071 IMP2YMR035W 534 nt4.38□□□□□ -1.71
VPS54Q12071 VPS68YOL129W 555 nt4.38□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms