Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 SLX1YBR228W 915 nt3.81□□□□□ -1.8
RRP40Q08285 ECM32YER176W 3366 nt3.81□□□□□ -1.8
RRP40Q08285 THI22YPR121W 1719 nt3.81□□□□□ -1.8
RRP40Q08285 PTA1YAL043C 2358 nt3.81□□□□□ -1.8
RRP40Q08285 MEF2YJL102W 2460 nt3.8□□□□□ -1.8
RRP40Q08285 INO2YDR123C 915 nt3.8□□□□□ -1.8
RRP40Q08285 YGL199CYGL199C 471 nt3.8□□□□□ -1.8
RRP40Q08285 UTP11YKL099C 753 nt3.8□□□□□ -1.8
RRP40Q08285 YBL029WYBL029W 1131 nt3.8□□□□□ -1.8
RRP40Q08285 YPT53YNL093W 663 nt3.8□□□□□ -1.8
RRP40Q08285 KEX1YGL203C 2190 nt3.79□□□□□ -1.8
RRP40Q08285 IKS1YJL057C 2004 nt3.79□□□□□ -1.8
RRP40Q08285 IRC22YEL001C 678 nt3.79□□□□□ -1.8
RRP40Q08285 YHR112CYHR112C 1137 nt3.79□□□□□ -1.8
RRP40Q08285 SRP40YKR092C 1221 nt3.79□□□□□ -1.8
RRP40Q08285 YLR156WYLR156W 345 nt3.79□□□□□ -1.8
RRP40Q08285 YLR159WYLR159W 345 nt3.79□□□□□ -1.8
RRP40Q08285 YLR161WYLR161W 345 nt3.79□□□□□ -1.8
RRP40Q08285 RPS19AYOL121C 435 nt3.79□□□□□ -1.8
RRP40Q08285 YPL073CYPL073C 486 nt3.79□□□□□ -1.8
RRP40Q08285 ARR1YPR199C 885 nt3.79□□□□□ -1.8
RRP40Q08285 YNR065CYNR065C 3351 nt3.79□□□□□ -1.8
RRP40Q08285 PUT2YHR037W 1728 nt3.78□□□□□ -1.8
RRP40Q08285 TMN2YDR107C 2019 nt3.78□□□□□ -1.8
RRP40Q08285 BCK2YER167W 2556 nt3.78□□□□□ -1.8
RRP40Q08285 LPP1YDR503C 825 nt3.78□□□□□ -1.8
RRP40Q08285 YGL088WYGL088W 366 nt3.78□□□□□ -1.8
RRP40Q08285 YHR032C-AYHR032C-A 120 nt3.78□□□□□ -1.8
RRP40Q08285 YIL163CYIL163C 354 nt3.78□□□□□ -1.8
RRP40Q08285 MRPL20YKR085C 588 nt3.78□□□□□ -1.8
RRP40Q08285 YLR124WYLR124W 345 nt3.78□□□□□ -1.8
RRP40Q08285 SAT4YCR008W 1812 nt3.78□□□□□ -1.8
RRP40Q08285 HST1YOL068C 1512 nt3.78□□□□□ -1.8
RRP40Q08285 DBP3YGL078C 1572 nt3.77□□□□□ -1.81
RRP40Q08285 BDP1YNL039W 1785 nt3.77□□□□□ -1.81
RRP40Q08285 NBP2YDR162C 711 nt3.77□□□□□ -1.81
RRP40Q08285 RTA1YGR213C 954 nt3.77□□□□□ -1.81
RRP40Q08285 ADD66YKL206C 804 nt3.77□□□□□ -1.81
RRP40Q08285 NRG2YBR066C 663 nt3.77□□□□□ -1.81
RRP40Q08285 YOL075CYOL075C 3885 nt3.76□□□□□ -1.81
RRP40Q08285 TPA1YER049W 1935 nt3.76□□□□□ -1.81
RRP40Q08285 SIR2YDL042C 1689 nt3.76□□□□□ -1.81
RRP40Q08285 ALG9YNL219C 1668 nt3.76□□□□□ -1.81
RRP40Q08285 SSH1YBR283C 1473 nt3.76□□□□□ -1.81
RRP40Q08285 HSP42YDR171W 1128 nt3.76□□□□□ -1.81
RRP40Q08285 AHA1YDR214W 1053 nt3.76□□□□□ -1.81
RRP40Q08285 MRPL7YDR237W 879 nt3.76□□□□□ -1.81
RRP40Q08285 YER085CYER085C 522 nt3.76□□□□□ -1.81
RRP40Q08285 TOM20YGR082W 552 nt3.76□□□□□ -1.81
RRP40Q08285 ASC1YMR116C 960 nt3.76□□□□□ -1.81
RRP40Q08285 DSC2YOL073C 969 nt3.76□□□□□ -1.81
RRP40Q08285 REX4YOL080C 870 nt3.76□□□□□ -1.81
RRP40Q08285 MFM1YPL060W 1242 nt3.76□□□□□ -1.81
RRP40Q08285 IDI1YPL117C 867 nt3.76□□□□□ -1.81
RRP40Q08285 YBR138CYBR138C 1575 nt3.76□□□□□ -1.81
RRP40Q08285 YIL092WYIL092W 1902 nt3.76□□□□□ -1.81
RRP40Q08285 PMT4YJR143C 2289 nt3.75□□□□□ -1.81
RRP40Q08285 VPS45YGL095C 1734 nt3.75□□□□□ -1.81
RRP40Q08285 ATG2YNL242W 4779 nt3.75□□□□□ -1.81
RRP40Q08285 YEL028WYEL028W 462 nt3.75□□□□□ -1.81
RRP40Q08285 SAE3YHR079C-A 276 nt3.75□□□□□ -1.81
RRP40Q08285 YRA2YKL214C 612 nt3.75□□□□□ -1.81
RRP40Q08285 SIW14YNL032W 846 nt3.75□□□□□ -1.81
RRP40Q08285 RPL18BYNL301C 561 nt3.75□□□□□ -1.81
RRP40Q08285 SNF8YPL002C 702 nt3.75□□□□□ -1.81
RRP40Q08285 NAT3YPR131C 588 nt3.75□□□□□ -1.81
RRP40Q08285 RPO21YDL140C 5202 nt3.75□□□□□ -1.81
RRP40Q08285 KTR7YIL085C 1554 nt3.75□□□□□ -1.81
RRP40Q08285 CWH43YCR017C 2862 nt3.75□□□□□ -1.81
RRP40Q08285 NTA1YJR062C 1374 nt3.75□□□□□ -1.81
RRP40Q08285 CHL1YPL008W 2586 nt3.74□□□□□ -1.81
RRP40Q08285 IRC9YJL142C 393 nt3.74□□□□□ -1.81
RRP40Q08285 OCT1YKL134C 2319 nt3.74□□□□□ -1.81
RRP40Q08285 PRM9YAR031W 897 nt3.74□□□□□ -1.81
RRP40Q08285 ELO3YLR372W 1038 nt3.74□□□□□ -1.81
RRP40Q08285 SHE1YBL031W 1017 nt3.74□□□□□ -1.81
RRP40Q08285 YBR056W-AYBR056W-A 201 nt3.74□□□□□ -1.81
RRP40Q08285 SET6YPL165C 1122 nt3.74□□□□□ -1.81
RRP40Q08285 PWR1PWR1 941 nt3.74□□□□□ -1.81
RRP40Q08285 KIN4YOR233W 2403 nt3.74□□□□□ -1.81
RRP40Q08285 TYW1YPL207W 2433 nt3.74□□□□□ -1.81
RRP40Q08285 POL12YBL035C 2118 nt3.74□□□□□ -1.81
RRP40Q08285 WHI4YDL224C 1950 nt3.73□□□□□ -1.81
RRP40Q08285 RPL19AYBR084C-A 570 nt3.73□□□□□ -1.81
RRP40Q08285 PRP9YDL030W 1593 nt3.72□□□□□ -1.81
RRP40Q08285 GGA1YDR358W 1674 nt3.72□□□□□ -1.81
RRP40Q08285 FMP30YPL103C 1407 nt3.72□□□□□ -1.81
RRP40Q08285 MNL1YHR204W 2391 nt3.72□□□□□ -1.81
RRP40Q08285 DAS2YDR020C 699 nt3.72□□□□□ -1.81
RRP40Q08285 YGL188CYGL188C 174 nt3.72□□□□□ -1.81
RRP40Q08285 CDC12YHR107C 1224 nt3.72□□□□□ -1.81
RRP40Q08285 COX2Q0250 756 nt3.72□□□□□ -1.81
RRP40Q08285 YNR061CYNR061C 660 nt3.72□□□□□ -1.81
RRP40Q08285 YOR034C-AYOR034C-A 243 nt3.72□□□□□ -1.81
RRP40Q08285 RET3YPL010W 570 nt3.72□□□□□ -1.81
RRP40Q08285 YBR219CYBR219C 384 nt3.72□□□□□ -1.81
RRP40Q08285 FAR8YMR029C 1572 nt3.72□□□□□ -1.81
RRP40Q08285 CDC6YJL194W 1542 nt3.71□□□□□ -1.82
RRP40Q08285 YGL262WYGL262W 528 nt3.71□□□□□ -1.82
RRP40Q08285 FUR1YHR128W 651 nt3.71□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms