Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAE1P78406 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.09■□□□□ 0.97
RAE1P78406 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RAE1P78406 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAE1P78406 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAE1P78406 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.08■□□□□ 0.97
RAE1P78406 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAE1P78406 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.08■□□□□ 0.97
RAE1P78406 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAE1P78406 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.08■□□□□ 0.96
RAE1P78406 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAE1P78406 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAE1P78406 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAE1P78406 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAE1P78406 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.07■□□□□ 0.96
RAE1P78406 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.07■□□□□ 0.96
RAE1P78406 AC009086.3-201ENST00000623486 1008 ntBASIC21.07■□□□□ 0.96
RAE1P78406 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAE1P78406 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAE1P78406 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.07■□□□□ 0.96
RAE1P78406 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAE1P78406 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RAE1P78406 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.06■□□□□ 0.96
RAE1P78406 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAE1P78406 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.06■□□□□ 0.96
RAE1P78406 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.06■□□□□ 0.96
RAE1P78406 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAE1P78406 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAE1P78406 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAE1P78406 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.06■□□□□ 0.96
RAE1P78406 AC242852.2-201ENST00000615738 1807 ntBASIC21.06■□□□□ 0.96
RAE1P78406 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAE1P78406 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAE1P78406 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAE1P78406 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RAE1P78406 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.05■□□□□ 0.96
RAE1P78406 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
RAE1P78406 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.05■□□□□ 0.96
RAE1P78406 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAE1P78406 AL117332.1-201ENST00000622628 974 ntBASIC21.05■□□□□ 0.96
RAE1P78406 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RAE1P78406 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAE1P78406 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAE1P78406 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAE1P78406 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAE1P78406 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAE1P78406 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.04■□□□□ 0.96
RAE1P78406 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.04■□□□□ 0.96
RAE1P78406 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAE1P78406 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAE1P78406 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.04■□□□□ 0.96
RAE1P78406 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAE1P78406 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.04■□□□□ 0.96
RAE1P78406 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.04■□□□□ 0.96
RAE1P78406 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.04■□□□□ 0.96
RAE1P78406 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.04■□□□□ 0.96
RAE1P78406 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAE1P78406 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RAE1P78406 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAE1P78406 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RAE1P78406 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.04■□□□□ 0.96
RAE1P78406 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAE1P78406 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAE1P78406 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RAE1P78406 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RAE1P78406 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RAE1P78406 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
RAE1P78406 AC080038.3-201ENST00000623346 1952 ntBASIC21.03■□□□□ 0.96
RAE1P78406 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAE1P78406 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAE1P78406 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAE1P78406 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.03■□□□□ 0.96
RAE1P78406 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAE1P78406 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.03■□□□□ 0.96
RAE1P78406 AC004687.1-201ENST00000579003 1625 ntBASIC21.03■□□□□ 0.96
RAE1P78406 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAE1P78406 AC139530.1-201ENST00000575312 1977 ntBASIC21.03■□□□□ 0.96
RAE1P78406 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.02■□□□□ 0.96
RAE1P78406 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAE1P78406 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAE1P78406 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.02■□□□□ 0.96
RAE1P78406 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAE1P78406 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RAE1P78406 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RAE1P78406 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAE1P78406 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAE1P78406 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAE1P78406 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAE1P78406 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAE1P78406 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.01■□□□□ 0.95
RAE1P78406 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAE1P78406 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.01■□□□□ 0.95
RAE1P78406 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
RAE1P78406 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RAE1P78406 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAE1P78406 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAE1P78406 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAE1P78406 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RAE1P78406 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21■□□□□ 0.95
RAE1P78406 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms