Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBA52P62987 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBA52P62987 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UBA52P62987 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBA52P62987 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBA52P62987 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
UBA52P62987 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.94■□□□□ 0.62
UBA52P62987 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBA52P62987 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBA52P62987 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
UBA52P62987 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBA52P62987 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBA52P62987 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
UBA52P62987 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.93■□□□□ 0.62
UBA52P62987 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
UBA52P62987 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.93■□□□□ 0.62
UBA52P62987 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.93■□□□□ 0.62
UBA52P62987 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.93■□□□□ 0.62
UBA52P62987 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.93■□□□□ 0.62
UBA52P62987 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.93■□□□□ 0.62
UBA52P62987 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.93■□□□□ 0.62
UBA52P62987 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.93■□□□□ 0.62
UBA52P62987 AC110285.6-201ENST00000617652 491 ntBASIC18.93■□□□□ 0.62
UBA52P62987 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.93■□□□□ 0.62
UBA52P62987 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBA52P62987 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.93■□□□□ 0.62
UBA52P62987 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBA52P62987 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBA52P62987 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
UBA52P62987 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.92■□□□□ 0.62
UBA52P62987 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBA52P62987 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.92■□□□□ 0.62
UBA52P62987 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBA52P62987 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBA52P62987 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBA52P62987 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.91■□□□□ 0.62
UBA52P62987 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBA52P62987 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBA52P62987 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UBA52P62987 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBA52P62987 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBA52P62987 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.91■□□□□ 0.62
UBA52P62987 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.91■□□□□ 0.62
UBA52P62987 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
UBA52P62987 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBA52P62987 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBA52P62987 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.91■□□□□ 0.62
UBA52P62987 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBA52P62987 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.91■□□□□ 0.62
UBA52P62987 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.9■□□□□ 0.62
UBA52P62987 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.9■□□□□ 0.62
UBA52P62987 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBA52P62987 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBA52P62987 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBA52P62987 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
UBA52P62987 AC096631.2-201ENST00000436136 790 ntBASIC18.9■□□□□ 0.62
UBA52P62987 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBA52P62987 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBA52P62987 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.9■□□□□ 0.62
UBA52P62987 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBA52P62987 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
UBA52P62987 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.89■□□□□ 0.62
UBA52P62987 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
UBA52P62987 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBA52P62987 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBA52P62987 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBA52P62987 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBA52P62987 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBA52P62987 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBA52P62987 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.89■□□□□ 0.61
UBA52P62987 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.89■□□□□ 0.61
UBA52P62987 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBA52P62987 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBA52P62987 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.88■□□□□ 0.61
UBA52P62987 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
UBA52P62987 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBA52P62987 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
UBA52P62987 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.88■□□□□ 0.61
UBA52P62987 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.88■□□□□ 0.61
UBA52P62987 MIR4466-201ENST00000606121 54 ntBASIC18.88■□□□□ 0.61
UBA52P62987 AC005837.3-201ENST00000612163 286 ntBASIC18.88■□□□□ 0.61
UBA52P62987 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBA52P62987 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.88■□□□□ 0.61
UBA52P62987 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.88■□□□□ 0.61
UBA52P62987 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBA52P62987 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBA52P62987 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
UBA52P62987 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms