Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB1AP62820 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB1AP62820 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB1AP62820 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB1AP62820 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB1AP62820 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RAB1AP62820 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB1AP62820 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB1AP62820 pRNA.6-201ENST00000610482 90 ntBASIC19.41■□□□□ 0.7
RAB1AP62820 pRNA.5-201ENST00000612139 90 ntBASIC19.41■□□□□ 0.7
RAB1AP62820 pRNA.11-201ENST00000618423 90 ntBASIC19.41■□□□□ 0.7
RAB1AP62820 pRNA.13-201ENST00000619112 90 ntBASIC19.41■□□□□ 0.7
RAB1AP62820 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB1AP62820 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB1AP62820 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.41■□□□□ 0.7
RAB1AP62820 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB1AP62820 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB1AP62820 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB1AP62820 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB1AP62820 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB1AP62820 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
RAB1AP62820 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB1AP62820 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB1AP62820 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB1AP62820 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.4■□□□□ 0.7
RAB1AP62820 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
RAB1AP62820 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB1AP62820 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB1AP62820 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB1AP62820 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB1AP62820 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB1AP62820 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB1AP62820 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB1AP62820 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB1AP62820 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB1AP62820 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.39■□□□□ 0.7
RAB1AP62820 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.39■□□□□ 0.7
RAB1AP62820 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB1AP62820 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB1AP62820 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.39■□□□□ 0.69
RAB1AP62820 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RAB1AP62820 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB1AP62820 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB1AP62820 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB1AP62820 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB1AP62820 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB1AP62820 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB1AP62820 UNC93B3-201ENST00000308076 687 ntBASIC19.38■□□□□ 0.69
RAB1AP62820 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB1AP62820 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB1AP62820 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.38■□□□□ 0.69
RAB1AP62820 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB1AP62820 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB1AP62820 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB1AP62820 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB1AP62820 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB1AP62820 MIR3181-201ENST00000578512 73 ntBASIC19.38■□□□□ 0.69
RAB1AP62820 AL499627.2-201ENST00000606283 725 ntBASIC19.38■□□□□ 0.69
RAB1AP62820 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB1AP62820 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 SERBP1P1-201ENST00000396021 1160 ntBASIC19.37■□□□□ 0.69
RAB1AP62820 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB1AP62820 AC096631.2-201ENST00000436136 790 ntBASIC19.37■□□□□ 0.69
RAB1AP62820 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB1AP62820 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB1AP62820 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RAB1AP62820 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RAB1AP62820 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB1AP62820 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB1AP62820 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB1AP62820 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB1AP62820 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB1AP62820 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB1AP62820 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB1AP62820 AL138724.1-201ENST00000606771 1088 ntBASIC19.36■□□□□ 0.69
RAB1AP62820 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB1AP62820 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB1AP62820 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB1AP62820 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB1AP62820 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB1AP62820 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAB1AP62820 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB1AP62820 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB1AP62820 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB1AP62820 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAB1AP62820 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB1AP62820 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB1AP62820 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms