Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM6P62312 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.45■□□□□ 0.7
LSM6P62312 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM6P62312 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.45■□□□□ 0.7
LSM6P62312 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LSM6P62312 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM6P62312 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM6P62312 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM6P62312 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LSM6P62312 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.44■□□□□ 0.7
LSM6P62312 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
LSM6P62312 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM6P62312 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LSM6P62312 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM6P62312 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM6P62312 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LSM6P62312 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.44■□□□□ 0.7
LSM6P62312 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM6P62312 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM6P62312 AC127496.7-201ENST00000625110 1798 ntBASIC19.44■□□□□ 0.7
LSM6P62312 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LSM6P62312 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM6P62312 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LSM6P62312 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM6P62312 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM6P62312 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM6P62312 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.43■□□□□ 0.7
LSM6P62312 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM6P62312 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.43■□□□□ 0.7
LSM6P62312 AL499627.2-201ENST00000606283 725 ntBASIC19.43■□□□□ 0.7
LSM6P62312 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM6P62312 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM6P62312 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM6P62312 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM6P62312 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM6P62312 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.42■□□□□ 0.7
LSM6P62312 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LSM6P62312 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM6P62312 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSM6P62312 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM6P62312 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LSM6P62312 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM6P62312 AC079834.2-201ENST00000609776 1949 ntBASIC19.41■□□□□ 0.7
LSM6P62312 GUSBP5-202ENST00000510805 1989 ntBASIC19.41■□□□□ 0.7
LSM6P62312 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM6P62312 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LSM6P62312 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM6P62312 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSM6P62312 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM6P62312 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.41■□□□□ 0.7
LSM6P62312 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM6P62312 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM6P62312 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM6P62312 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LSM6P62312 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM6P62312 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSM6P62312 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LSM6P62312 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM6P62312 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LSM6P62312 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSM6P62312 AL356441.2-201ENST00000443009 864 ntBASIC19.4■□□□□ 0.7
LSM6P62312 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.4■□□□□ 0.7
LSM6P62312 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSM6P62312 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LSM6P62312 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.4■□□□□ 0.7
LSM6P62312 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.4■□□□□ 0.7
LSM6P62312 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.4■□□□□ 0.7
LSM6P62312 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM6P62312 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM6P62312 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSM6P62312 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM6P62312 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM6P62312 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM6P62312 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM6P62312 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.39■□□□□ 0.69
LSM6P62312 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.39■□□□□ 0.69
LSM6P62312 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM6P62312 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM6P62312 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM6P62312 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM6P62312 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM6P62312 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM6P62312 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM6P62312 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM6P62312 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM6P62312 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM6P62312 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LSM6P62312 ECEL1P1-201ENST00000373592 1742 ntBASIC19.38■□□□□ 0.69
LSM6P62312 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms