Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC6A1P30531 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A1P30531 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A1P30531 ATP5G2P3-201ENST00000429083 425 ntBASIC19.06■□□□□ 0.64
SLC6A1P30531 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SLC6A1P30531 AC026202.3-201ENST00000600805 1127 ntBASIC19.06■□□□□ 0.64
SLC6A1P30531 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A1P30531 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A1P30531 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC6A1P30531 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC6A1P30531 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC6A1P30531 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SLC6A1P30531 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SLC6A1P30531 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 AC009831.1-201ENST00000580420 1582 ntBASIC19.05■□□□□ 0.64
SLC6A1P30531 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A1P30531 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A1P30531 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC6A1P30531 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A1P30531 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A1P30531 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A1P30531 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A1P30531 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A1P30531 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A1P30531 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A1P30531 AL033527.3-201ENST00000566366 1196 ntBASIC19.04■□□□□ 0.64
SLC6A1P30531 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A1P30531 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A1P30531 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A1P30531 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A1P30531 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A1P30531 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A1P30531 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A1P30531 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A1P30531 AC004987.1-201ENST00000428627 508 ntBASIC19.03■□□□□ 0.64
SLC6A1P30531 AC093536.1-201ENST00000569153 554 ntBASIC19.03■□□□□ 0.64
SLC6A1P30531 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SLC6A1P30531 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SLC6A1P30531 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A1P30531 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A1P30531 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC6A1P30531 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC6A1P30531 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A1P30531 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A1P30531 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A1P30531 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A1P30531 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC6A1P30531 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A1P30531 AC010542.4-201ENST00000563151 1910 ntBASIC19.02■□□□□ 0.64
SLC6A1P30531 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC6A1P30531 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A1P30531 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A1P30531 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SLC6A1P30531 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A1P30531 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC6A1P30531 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.02■□□□□ 0.64
SLC6A1P30531 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A1P30531 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A1P30531 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A1P30531 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC6A1P30531 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC6A1P30531 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC6A1P30531 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.02■□□□□ 0.63
SLC6A1P30531 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.02■□□□□ 0.63
SLC6A1P30531 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A1P30531 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A1P30531 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A1P30531 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A1P30531 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A1P30531 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC6A1P30531 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC6A1P30531 AL592293.1-201ENST00000502889 1188 ntBASIC19.01■□□□□ 0.63
SLC6A1P30531 RAP2CP1-202ENST00000605179 643 ntBASIC19.01■□□□□ 0.63
SLC6A1P30531 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A1P30531 AC129492.7-201ENST00000622992 756 ntBASIC19.01■□□□□ 0.63
SLC6A1P30531 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A1P30531 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A1P30531 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A1P30531 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A1P30531 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A1P30531 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A1P30531 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC6A1P30531 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SLC6A1P30531 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SLC6A1P30531 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A1P30531 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC6A1P30531 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SLC6A1P30531 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms