Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 RAD4YER162C 2265 nt3.18□□□□□ -1.9
CDC39P25655 ECM8YBR076W 1065 nt3.18□□□□□ -1.9
CDC39P25655 NUG1YER006W 1563 nt3.18□□□□□ -1.9
CDC39P25655 TRX3YCR083W 384 nt3.17□□□□□ -1.9
CDC39P25655 NIS1YNL078W 1224 nt3.17□□□□□ -1.9
CDC39P25655 ECM7YLR443W 1347 nt3.16□□□□□ -1.9
CDC39P25655 HOS3YPL116W 2094 nt3.16□□□□□ -1.9
CDC39P25655 TRP4YDR354W 1143 nt3.16□□□□□ -1.9
CDC39P25655 JLP1YLL057C 1239 nt3.16□□□□□ -1.9
CDC39P25655 CUZ1YNL155W 825 nt3.16□□□□□ -1.9
CDC39P25655 BMT2YBR141C 1014 nt3.16□□□□□ -1.9
CDC39P25655 VID28YIL017C 2766 nt3.16□□□□□ -1.9
CDC39P25655 DBP3YGL078C 1572 nt3.16□□□□□ -1.9
CDC39P25655 TSR1YDL060W 2367 nt3.16□□□□□ -1.9
CDC39P25655 ASP1YDR321W 1146 nt3.16□□□□□ -1.9
CDC39P25655 RFC3YNL290W 1023 nt3.16□□□□□ -1.9
CDC39P25655 NAT5YOR253W 531 nt3.16□□□□□ -1.9
CDC39P25655 TGL4YKR089C 2733 nt3.16□□□□□ -1.9
CDC39P25655 PRP19YLL036C 1512 nt3.16□□□□□ -1.9
CDC39P25655 SRO7YPR032W 3102 nt3.15□□□□□ -1.9
CDC39P25655 NNK1YKL171W 2787 nt3.15□□□□□ -1.91
CDC39P25655 KRI1YNL308C 1776 nt3.15□□□□□ -1.91
CDC39P25655 RMD1YDL001W 1293 nt3.15□□□□□ -1.91
CDC39P25655 APA2YDR530C 978 nt3.15□□□□□ -1.91
CDC39P25655 IRC9YJL142C 393 nt3.15□□□□□ -1.91
CDC39P25655 ENT3YJR125C 1227 nt3.15□□□□□ -1.91
CDC39P25655 STB2YMR053C 2553 nt3.15□□□□□ -1.91
CDC39P25655 TAF1YGR274C 3201 nt3.15□□□□□ -1.91
CDC39P25655 RDS1YCR106W 2499 nt3.15□□□□□ -1.91
CDC39P25655 FKH2YNL068C 2589 nt3.15□□□□□ -1.91
CDC39P25655 ATG18YFR021W 1503 nt3.15□□□□□ -1.91
CDC39P25655 IZH3YLR023C 1632 nt3.14□□□□□ -1.91
CDC39P25655 YER134CYER134C 537 nt3.14□□□□□ -1.91
CDC39P25655 OPY1YBR129C 987 nt3.14□□□□□ -1.91
CDC39P25655 PRP9YDL030W 1593 nt3.14□□□□□ -1.91
CDC39P25655 MRH4YGL064C 1686 nt3.14□□□□□ -1.91
CDC39P25655 YER077CYER077C 2067 nt3.14□□□□□ -1.91
CDC39P25655 RKM2YDR198C 1440 nt3.14□□□□□ -1.91
CDC39P25655 ELM1YKL048C 1923 nt3.14□□□□□ -1.91
CDC39P25655 MRPL11YDL202W 750 nt3.14□□□□□ -1.91
CDC39P25655 YEL074WYEL074W 339 nt3.14□□□□□ -1.91
CDC39P25655 YGR122WYGR122W 1209 nt3.14□□□□□ -1.91
CDC39P25655 AIR1YIL079C 1083 nt3.14□□□□□ -1.91
CDC39P25655 COX19YLL018C-A 297 nt3.14□□□□□ -1.91
CDC39P25655 MED4YOR174W 855 nt3.14□□□□□ -1.91
CDC39P25655 YLR152CYLR152C 1731 nt3.14□□□□□ -1.91
CDC39P25655 RFT1YBL020W 1725 nt3.14□□□□□ -1.91
CDC39P25655 YDR261C-DYDR261C-D 4815 nt3.13□□□□□ -1.91
CDC39P25655 PUB1YNL016W 1362 nt3.13□□□□□ -1.91
CDC39P25655 SKI6YGR195W 741 nt3.13□□□□□ -1.91
CDC39P25655 SHE1YBL031W 1017 nt3.13□□□□□ -1.91
CDC39P25655 URA7YBL039C 1740 nt3.13□□□□□ -1.91
CDC39P25655 TRE1YPL176C 2352 nt3.13□□□□□ -1.91
CDC39P25655 ABP140YOR239W 1887 nt3.13□□□□□ -1.91
CDC39P25655 LOS1YKL205W 3303 nt3.13□□□□□ -1.91
CDC39P25655 RPL19BYBL027W 570 nt3.13□□□□□ -1.91
CDC39P25655 MSD1YPL104W 1977 nt3.13□□□□□ -1.91
CDC39P25655 RRN6YBL014C 2685 nt3.13□□□□□ -1.91
CDC39P25655 YBR139WYBR139W 1527 nt3.13□□□□□ -1.91
CDC39P25655 PXA1YPL147W 2613 nt3.12□□□□□ -1.91
CDC39P25655 SPT10YJL127C 1923 nt3.12□□□□□ -1.91
CDC39P25655 STE12YHR084W 2067 nt3.12□□□□□ -1.91
CDC39P25655 HOS2YGL194C 1359 nt3.12□□□□□ -1.91
CDC39P25655 YTM1YOR272W 1383 nt3.12□□□□□ -1.91
CDC39P25655 NTH1YDR001C 2256 nt3.12□□□□□ -1.91
CDC39P25655 YER076CYER076C 909 nt3.12□□□□□ -1.91
CDC39P25655 CDC8YJR057W 651 nt3.12□□□□□ -1.91
CDC39P25655 RIM11YMR139W 1113 nt3.12□□□□□ -1.91
CDC39P25655 YBR137WYBR137W 540 nt3.12□□□□□ -1.91
CDC39P25655 CHK1YBR274W 1584 nt3.12□□□□□ -1.91
CDC39P25655 VPS30YPL120W 1674 nt3.11□□□□□ -1.91
CDC39P25655 RIB4YOL143C 510 nt3.11□□□□□ -1.91
CDC39P25655 PNG1YPL096W 1092 nt3.11□□□□□ -1.91
CDC39P25655 RDH54YBR073W 2877 nt3.11□□□□□ -1.91
CDC39P25655 YPR003CYPR003C 2265 nt3.11□□□□□ -1.91
CDC39P25655 GSM1YJL103C 1857 nt3.11□□□□□ -1.91
CDC39P25655 HOM3YER052C 1584 nt3.11□□□□□ -1.91
CDC39P25655 RRP17YDR412W 708 nt3.11□□□□□ -1.91
CDC39P25655 MHO1YJR008W 1017 nt3.11□□□□□ -1.91
CDC39P25655 YPT7YML001W 627 nt3.11□□□□□ -1.91
CDC39P25655 HFA1YMR207C 6372 nt3.11□□□□□ -1.91
CDC39P25655 APE2YKL157W 2859 nt3.11□□□□□ -1.91
CDC39P25655 SAC1YKL212W 1872 nt3.1□□□□□ -1.91
CDC39P25655 YHR214C-EYHR214C-E 300 nt3.1□□□□□ -1.91
CDC39P25655 YAR070CYAR070C 300 nt3.1□□□□□ -1.91
CDC39P25655 YNL165WYNL165W 1221 nt3.1□□□□□ -1.91
CDC39P25655 BUD27YFL023W 2391 nt3.1□□□□□ -1.91
CDC39P25655 YLR446WYLR446W 1302 nt3.1□□□□□ -1.91
CDC39P25655 YDR250CYDR250C 276 nt3.1□□□□□ -1.91
CDC39P25655 YGR161W-CYGR161W-C 279 nt3.1□□□□□ -1.91
CDC39P25655 AAD10YJR155W 867 nt3.1□□□□□ -1.91
CDC39P25655 ADD66YKL206C 804 nt3.1□□□□□ -1.91
CDC39P25655 IDP2YLR174W 1239 nt3.1□□□□□ -1.91
CDC39P25655 YMR085WYMR085W 1299 nt3.1□□□□□ -1.91
CDC39P25655 UBX5YDR330W 1503 nt3.1□□□□□ -1.91
CDC39P25655 HST1YOL068C 1512 nt3.1□□□□□ -1.91
CDC39P25655 PMT6YGR199W 2280 nt3.09□□□□□ -1.91
CDC39P25655 PHO87YCR037C 2772 nt3.09□□□□□ -1.91
CDC39P25655 RAD14YMR201C 1116 nt3.09□□□□□ -1.91
CDC39P25655 MEF2YJL102W 2460 nt3.09□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms