Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3BP20337 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3BP20337 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RAB3BP20337 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RAB3BP20337 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3BP20337 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RAB3BP20337 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RAB3BP20337 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB3BP20337 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RAB3BP20337 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3BP20337 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RAB3BP20337 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB3BP20337 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3BP20337 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB3BP20337 AC026310.3-201ENST00000625186 2373 ntBASIC19.36■□□□□ 0.69
RAB3BP20337 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3BP20337 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RAB3BP20337 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3BP20337 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3BP20337 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB3BP20337 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB3BP20337 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB3BP20337 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB3BP20337 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3BP20337 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.36■□□□□ 0.69
RAB3BP20337 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3BP20337 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3BP20337 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3BP20337 AC087742.1-201ENST00000575880 1738 ntBASIC19.35■□□□□ 0.69
RAB3BP20337 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3BP20337 GPX1-201ENST00000419349 1106 ntBASIC19.35■□□□□ 0.69
RAB3BP20337 SPCS2P3-201ENST00000500401 656 ntBASIC19.35■□□□□ 0.69
RAB3BP20337 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RAB3BP20337 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB3BP20337 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3BP20337 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3BP20337 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3BP20337 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3BP20337 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
RAB3BP20337 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB3BP20337 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3BP20337 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RAB3BP20337 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3BP20337 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3BP20337 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
RAB3BP20337 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3BP20337 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3BP20337 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3BP20337 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RAB3BP20337 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB3BP20337 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3BP20337 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB3BP20337 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB3BP20337 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB3BP20337 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB3BP20337 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB3BP20337 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB3BP20337 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB3BP20337 SLC25A24-204ENST00000569674 2357 ntBASIC19.33■□□□□ 0.68
RAB3BP20337 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB3BP20337 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB3BP20337 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RAB3BP20337 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB3BP20337 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
RAB3BP20337 MIR6765-201ENST00000614092 87 ntBASIC19.32■□□□□ 0.68
RAB3BP20337 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.32■□□□□ 0.68
RAB3BP20337 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB3BP20337 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RAB3BP20337 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB3BP20337 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.32■□□□□ 0.68
RAB3BP20337 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3BP20337 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3BP20337 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB3BP20337 LONRF2P2-201ENST00000439212 571 ntBASIC19.31■□□□□ 0.68
RAB3BP20337 AL592293.1-201ENST00000502889 1188 ntBASIC19.31■□□□□ 0.68
RAB3BP20337 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3BP20337 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3BP20337 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB3BP20337 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3BP20337 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB3BP20337 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3BP20337 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3BP20337 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3BP20337 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RAB3BP20337 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAB3BP20337 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3BP20337 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RAB3BP20337 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3BP20337 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB3BP20337 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms