Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 RPS16BYDL083C 432 nt3.6□□□□□ -1.83
RPL40BP0CH09 RAM1YDL090C 1296 nt3.6□□□□□ -1.83
RPL40BP0CH09 YBL059WYBL059W 582 nt3.6□□□□□ -1.83
RPL40BP0CH09 SMF1YOL122C 1728 nt3.6□□□□□ -1.83
RPL40BP0CH09 PTM1YKL039W 1572 nt3.59□□□□□ -1.83
RPL40BP0CH09 YDL124WYDL124W 939 nt3.59□□□□□ -1.83
RPL40BP0CH09 RPL8AYHL033C 771 nt3.59□□□□□ -1.83
RPL40BP0CH09 APC9YLR102C 798 nt3.59□□□□□ -1.83
RPL40BP0CH09 SEC72YLR292C 582 nt3.59□□□□□ -1.83
RPL40BP0CH09 CUZ1YNL155W 825 nt3.59□□□□□ -1.83
RPL40BP0CH09 ALR2YFL050C 2577 nt3.59□□□□□ -1.83
RPL40BP0CH09 MST1YKL194C 1389 nt3.59□□□□□ -1.83
RPL40BP0CH09 MEC3YLR288C 1425 nt3.59□□□□□ -1.84
RPL40BP0CH09 MMT1YMR177W 1533 nt3.59□□□□□ -1.84
RPL40BP0CH09 SRP72YPL210C 1923 nt3.58□□□□□ -1.84
RPL40BP0CH09 YNL247WYNL247W 2304 nt3.58□□□□□ -1.84
RPL40BP0CH09 BIK1YCL029C 1323 nt3.58□□□□□ -1.84
RPL40BP0CH09 NKP1YDR383C 717 nt3.57□□□□□ -1.84
RPL40BP0CH09 RRP17YDR412W 708 nt3.57□□□□□ -1.84
RPL40BP0CH09 YEL074WYEL074W 339 nt3.57□□□□□ -1.84
RPL40BP0CH09 MHO1YJR008W 1017 nt3.57□□□□□ -1.84
RPL40BP0CH09 ADD66YKL206C 804 nt3.57□□□□□ -1.84
RPL40BP0CH09 YLR152CYLR152C 1731 nt3.57□□□□□ -1.84
RPL40BP0CH09 UTP23YOR004W 765 nt3.57□□□□□ -1.84
RPL40BP0CH09 YOR008W-BYOR008W-B 102 nt3.57□□□□□ -1.84
RPL40BP0CH09 MCM4YPR019W 2802 nt3.57□□□□□ -1.84
RPL40BP0CH09 NAB6YML117W 3405 nt3.56□□□□□ -1.84
RPL40BP0CH09 ARG4YHR018C 1392 nt3.56□□□□□ -1.84
RPL40BP0CH09 YDR271CYDR271C 372 nt3.56□□□□□ -1.84
RPL40BP0CH09 YDR401WYDR401W 564 nt3.56□□□□□ -1.84
RPL40BP0CH09 COA4YLR218C 453 nt3.56□□□□□ -1.84
RPL40BP0CH09 RIB4YOL143C 510 nt3.56□□□□□ -1.84
RPL40BP0CH09 EFM2YBR271W 1260 nt3.56□□□□□ -1.84
RPL40BP0CH09 RPB2YOR151C 3675 nt3.56□□□□□ -1.84
RPL40BP0CH09 DIP2YLR129W 2832 nt3.56□□□□□ -1.84
RPL40BP0CH09 PMT6YGR199W 2280 nt3.55□□□□□ -1.84
RPL40BP0CH09 NHP10YDL002C 612 nt3.55□□□□□ -1.84
RPL40BP0CH09 YMR030W-AYMR030W-A 291 nt3.55□□□□□ -1.84
RPL40BP0CH09 GSM1YJL103C 1857 nt3.55□□□□□ -1.84
RPL40BP0CH09 NOP7YGR103W 1818 nt3.55□□□□□ -1.84
RPL40BP0CH09 LEU1YGL009C 2340 nt3.55□□□□□ -1.84
RPL40BP0CH09 NTH1YDR001C 2256 nt3.55□□□□□ -1.84
RPL40BP0CH09 MLH2YLR035C 2088 nt3.55□□□□□ -1.84
RPL40BP0CH09 ECM32YER176W 3366 nt3.54□□□□□ -1.84
RPL40BP0CH09 NBP2YDR162C 711 nt3.54□□□□□ -1.84
RPL40BP0CH09 YHR112CYHR112C 1137 nt3.54□□□□□ -1.84
RPL40BP0CH09 PSF3YOL146W 585 nt3.54□□□□□ -1.84
RPL40BP0CH09 IMD4YML056C 1575 nt3.54□□□□□ -1.84
RPL40BP0CH09 TGL4YKR089C 2733 nt3.54□□□□□ -1.84
RPL40BP0CH09 AVT1YJR001W 1809 nt3.54□□□□□ -1.84
RPL40BP0CH09 SSU1YPL092W 1377 nt3.53□□□□□ -1.84
RPL40BP0CH09 MNL1YHR204W 2391 nt3.53□□□□□ -1.84
RPL40BP0CH09 NCR1YPL006W 3513 nt3.53□□□□□ -1.84
RPL40BP0CH09 NAT3YPR131C 588 nt3.53□□□□□ -1.84
RPL40BP0CH09 GSC2YGR032W 5688 nt3.53□□□□□ -1.84
RPL40BP0CH09 ATG1YGL180W 2694 nt3.53□□□□□ -1.84
RPL40BP0CH09 YLH47YPR125W 1365 nt3.52□□□□□ -1.85
RPL40BP0CH09 IZH3YLR023C 1632 nt3.52□□□□□ -1.85
RPL40BP0CH09 YGR053CYGR053C 852 nt3.52□□□□□ -1.85
RPL40BP0CH09 YGR122WYGR122W 1209 nt3.52□□□□□ -1.85
RPL40BP0CH09 HIS5YIL116W 1158 nt3.52□□□□□ -1.85
RPL40BP0CH09 YML119WYML119W 1074 nt3.52□□□□□ -1.85
RPL40BP0CH09 RFT1YBL020W 1725 nt3.52□□□□□ -1.85
RPL40BP0CH09 AKR1YDR264C 2295 nt3.51□□□□□ -1.85
RPL40BP0CH09 UGA3YDL170W 1587 nt3.51□□□□□ -1.85
RPL40BP0CH09 SPC19YDR201W 498 nt3.51□□□□□ -1.85
RPL40BP0CH09 tF(GAA)DtF(GAA)D 73 nt3.51□□□□□ -1.85
RPL40BP0CH09 tF(GAA)NtF(GAA)N 73 nt3.51□□□□□ -1.85
RPL40BP0CH09 YJU2YKL095W 837 nt3.51□□□□□ -1.85
RPL40BP0CH09 URA4YLR420W 1095 nt3.51□□□□□ -1.85
RPL40BP0CH09 OCA1YNL099C 717 nt3.51□□□□□ -1.85
RPL40BP0CH09 YCL022CYCL022C 516 nt3.51□□□□□ -1.85
RPL40BP0CH09 SPT23YKL020C 3249 nt3.51□□□□□ -1.85
RPL40BP0CH09 CHD1YER164W 4407 nt3.51□□□□□ -1.85
RPL40BP0CH09 YKL050CYKL050C 2769 nt3.51□□□□□ -1.85
RPL40BP0CH09 ROD1YOR018W 2514 nt3.5□□□□□ -1.85
RPL40BP0CH09 MET3YJR010W 1536 nt3.5□□□□□ -1.85
RPL40BP0CH09 APE1YKL103C 1545 nt3.5□□□□□ -1.85
RPL40BP0CH09 RCM1YNL022C 1473 nt3.5□□□□□ -1.85
RPL40BP0CH09 ELO2YCR034W 1044 nt3.5□□□□□ -1.85
RPL40BP0CH09 ELF1YKL160W 438 nt3.5□□□□□ -1.85
RPL40BP0CH09 YBL108WYBL108W 306 nt3.5□□□□□ -1.85
RPL40BP0CH09 PKH1YDR490C 2301 nt3.5□□□□□ -1.85
RPL40BP0CH09 TRK1YJL129C 3708 nt3.5□□□□□ -1.85
RPL40BP0CH09 ARO1YDR127W 4767 nt3.5□□□□□ -1.85
RPL40BP0CH09 CHL1YPL008W 2586 nt3.5□□□□□ -1.85
RPL40BP0CH09 TAF8YML114C 1533 nt3.49□□□□□ -1.85
RPL40BP0CH09 ACE2YLR131C 2313 nt3.49□□□□□ -1.85
RPL40BP0CH09 NUS1YDL193W 1128 nt3.49□□□□□ -1.85
RPL40BP0CH09 YGL218WYGL218W 651 nt3.49□□□□□ -1.85
RPL40BP0CH09 YHR180WYHR180W 492 nt3.49□□□□□ -1.85
RPL40BP0CH09 AGE2YIL044C 897 nt3.49□□□□□ -1.85
RPL40BP0CH09 SHG1YBR258C 429 nt3.49□□□□□ -1.85
RPL40BP0CH09 YTM1YOR272W 1383 nt3.49□□□□□ -1.85
RPL40BP0CH09 ALG2YGL065C 1512 nt3.49□□□□□ -1.85
RPL40BP0CH09 GIP1YBR045C 1920 nt3.48□□□□□ -1.85
RPL40BP0CH09 FRE7YOL152W 1863 nt3.48□□□□□ -1.85
RPL40BP0CH09 IDP2YLR174W 1239 nt3.48□□□□□ -1.85
RPL40BP0CH09 CCW14YLR390W-A 717 nt3.48□□□□□ -1.85
RPL40BP0CH09 SWH1YAR042W 3567 nt3.48□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms