Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 RPS16BYDL083C 432 nt3.6□□□□□ -1.83
RPL40AP0CH08 RAM1YDL090C 1296 nt3.6□□□□□ -1.83
RPL40AP0CH08 YBL059WYBL059W 582 nt3.6□□□□□ -1.83
RPL40AP0CH08 SMF1YOL122C 1728 nt3.6□□□□□ -1.83
RPL40AP0CH08 PTM1YKL039W 1572 nt3.59□□□□□ -1.83
RPL40AP0CH08 YDL124WYDL124W 939 nt3.59□□□□□ -1.83
RPL40AP0CH08 RPL8AYHL033C 771 nt3.59□□□□□ -1.83
RPL40AP0CH08 APC9YLR102C 798 nt3.59□□□□□ -1.83
RPL40AP0CH08 SEC72YLR292C 582 nt3.59□□□□□ -1.83
RPL40AP0CH08 CUZ1YNL155W 825 nt3.59□□□□□ -1.83
RPL40AP0CH08 ALR2YFL050C 2577 nt3.59□□□□□ -1.83
RPL40AP0CH08 MST1YKL194C 1389 nt3.59□□□□□ -1.83
RPL40AP0CH08 MEC3YLR288C 1425 nt3.59□□□□□ -1.84
RPL40AP0CH08 MMT1YMR177W 1533 nt3.59□□□□□ -1.84
RPL40AP0CH08 SRP72YPL210C 1923 nt3.58□□□□□ -1.84
RPL40AP0CH08 YNL247WYNL247W 2304 nt3.58□□□□□ -1.84
RPL40AP0CH08 BIK1YCL029C 1323 nt3.58□□□□□ -1.84
RPL40AP0CH08 NKP1YDR383C 717 nt3.57□□□□□ -1.84
RPL40AP0CH08 RRP17YDR412W 708 nt3.57□□□□□ -1.84
RPL40AP0CH08 YEL074WYEL074W 339 nt3.57□□□□□ -1.84
RPL40AP0CH08 MHO1YJR008W 1017 nt3.57□□□□□ -1.84
RPL40AP0CH08 ADD66YKL206C 804 nt3.57□□□□□ -1.84
RPL40AP0CH08 YLR152CYLR152C 1731 nt3.57□□□□□ -1.84
RPL40AP0CH08 UTP23YOR004W 765 nt3.57□□□□□ -1.84
RPL40AP0CH08 YOR008W-BYOR008W-B 102 nt3.57□□□□□ -1.84
RPL40AP0CH08 MCM4YPR019W 2802 nt3.57□□□□□ -1.84
RPL40AP0CH08 NAB6YML117W 3405 nt3.56□□□□□ -1.84
RPL40AP0CH08 ARG4YHR018C 1392 nt3.56□□□□□ -1.84
RPL40AP0CH08 YDR271CYDR271C 372 nt3.56□□□□□ -1.84
RPL40AP0CH08 YDR401WYDR401W 564 nt3.56□□□□□ -1.84
RPL40AP0CH08 COA4YLR218C 453 nt3.56□□□□□ -1.84
RPL40AP0CH08 RIB4YOL143C 510 nt3.56□□□□□ -1.84
RPL40AP0CH08 EFM2YBR271W 1260 nt3.56□□□□□ -1.84
RPL40AP0CH08 RPB2YOR151C 3675 nt3.56□□□□□ -1.84
RPL40AP0CH08 DIP2YLR129W 2832 nt3.56□□□□□ -1.84
RPL40AP0CH08 PMT6YGR199W 2280 nt3.55□□□□□ -1.84
RPL40AP0CH08 NHP10YDL002C 612 nt3.55□□□□□ -1.84
RPL40AP0CH08 YMR030W-AYMR030W-A 291 nt3.55□□□□□ -1.84
RPL40AP0CH08 GSM1YJL103C 1857 nt3.55□□□□□ -1.84
RPL40AP0CH08 NOP7YGR103W 1818 nt3.55□□□□□ -1.84
RPL40AP0CH08 LEU1YGL009C 2340 nt3.55□□□□□ -1.84
RPL40AP0CH08 NTH1YDR001C 2256 nt3.55□□□□□ -1.84
RPL40AP0CH08 MLH2YLR035C 2088 nt3.55□□□□□ -1.84
RPL40AP0CH08 ECM32YER176W 3366 nt3.54□□□□□ -1.84
RPL40AP0CH08 NBP2YDR162C 711 nt3.54□□□□□ -1.84
RPL40AP0CH08 YHR112CYHR112C 1137 nt3.54□□□□□ -1.84
RPL40AP0CH08 PSF3YOL146W 585 nt3.54□□□□□ -1.84
RPL40AP0CH08 IMD4YML056C 1575 nt3.54□□□□□ -1.84
RPL40AP0CH08 TGL4YKR089C 2733 nt3.54□□□□□ -1.84
RPL40AP0CH08 AVT1YJR001W 1809 nt3.54□□□□□ -1.84
RPL40AP0CH08 SSU1YPL092W 1377 nt3.53□□□□□ -1.84
RPL40AP0CH08 MNL1YHR204W 2391 nt3.53□□□□□ -1.84
RPL40AP0CH08 NCR1YPL006W 3513 nt3.53□□□□□ -1.84
RPL40AP0CH08 NAT3YPR131C 588 nt3.53□□□□□ -1.84
RPL40AP0CH08 GSC2YGR032W 5688 nt3.53□□□□□ -1.84
RPL40AP0CH08 ATG1YGL180W 2694 nt3.53□□□□□ -1.84
RPL40AP0CH08 YLH47YPR125W 1365 nt3.52□□□□□ -1.85
RPL40AP0CH08 IZH3YLR023C 1632 nt3.52□□□□□ -1.85
RPL40AP0CH08 YGR053CYGR053C 852 nt3.52□□□□□ -1.85
RPL40AP0CH08 YGR122WYGR122W 1209 nt3.52□□□□□ -1.85
RPL40AP0CH08 HIS5YIL116W 1158 nt3.52□□□□□ -1.85
RPL40AP0CH08 YML119WYML119W 1074 nt3.52□□□□□ -1.85
RPL40AP0CH08 RFT1YBL020W 1725 nt3.52□□□□□ -1.85
RPL40AP0CH08 AKR1YDR264C 2295 nt3.51□□□□□ -1.85
RPL40AP0CH08 UGA3YDL170W 1587 nt3.51□□□□□ -1.85
RPL40AP0CH08 SPC19YDR201W 498 nt3.51□□□□□ -1.85
RPL40AP0CH08 tF(GAA)DtF(GAA)D 73 nt3.51□□□□□ -1.85
RPL40AP0CH08 tF(GAA)NtF(GAA)N 73 nt3.51□□□□□ -1.85
RPL40AP0CH08 YJU2YKL095W 837 nt3.51□□□□□ -1.85
RPL40AP0CH08 URA4YLR420W 1095 nt3.51□□□□□ -1.85
RPL40AP0CH08 OCA1YNL099C 717 nt3.51□□□□□ -1.85
RPL40AP0CH08 YCL022CYCL022C 516 nt3.51□□□□□ -1.85
RPL40AP0CH08 SPT23YKL020C 3249 nt3.51□□□□□ -1.85
RPL40AP0CH08 CHD1YER164W 4407 nt3.51□□□□□ -1.85
RPL40AP0CH08 YKL050CYKL050C 2769 nt3.51□□□□□ -1.85
RPL40AP0CH08 ROD1YOR018W 2514 nt3.5□□□□□ -1.85
RPL40AP0CH08 MET3YJR010W 1536 nt3.5□□□□□ -1.85
RPL40AP0CH08 APE1YKL103C 1545 nt3.5□□□□□ -1.85
RPL40AP0CH08 RCM1YNL022C 1473 nt3.5□□□□□ -1.85
RPL40AP0CH08 ELO2YCR034W 1044 nt3.5□□□□□ -1.85
RPL40AP0CH08 ELF1YKL160W 438 nt3.5□□□□□ -1.85
RPL40AP0CH08 YBL108WYBL108W 306 nt3.5□□□□□ -1.85
RPL40AP0CH08 PKH1YDR490C 2301 nt3.5□□□□□ -1.85
RPL40AP0CH08 TRK1YJL129C 3708 nt3.5□□□□□ -1.85
RPL40AP0CH08 ARO1YDR127W 4767 nt3.5□□□□□ -1.85
RPL40AP0CH08 CHL1YPL008W 2586 nt3.5□□□□□ -1.85
RPL40AP0CH08 TAF8YML114C 1533 nt3.49□□□□□ -1.85
RPL40AP0CH08 ACE2YLR131C 2313 nt3.49□□□□□ -1.85
RPL40AP0CH08 NUS1YDL193W 1128 nt3.49□□□□□ -1.85
RPL40AP0CH08 YGL218WYGL218W 651 nt3.49□□□□□ -1.85
RPL40AP0CH08 YHR180WYHR180W 492 nt3.49□□□□□ -1.85
RPL40AP0CH08 AGE2YIL044C 897 nt3.49□□□□□ -1.85
RPL40AP0CH08 SHG1YBR258C 429 nt3.49□□□□□ -1.85
RPL40AP0CH08 YTM1YOR272W 1383 nt3.49□□□□□ -1.85
RPL40AP0CH08 ALG2YGL065C 1512 nt3.49□□□□□ -1.85
RPL40AP0CH08 GIP1YBR045C 1920 nt3.48□□□□□ -1.85
RPL40AP0CH08 FRE7YOL152W 1863 nt3.48□□□□□ -1.85
RPL40AP0CH08 IDP2YLR174W 1239 nt3.48□□□□□ -1.85
RPL40AP0CH08 CCW14YLR390W-A 717 nt3.48□□□□□ -1.85
RPL40AP0CH08 SWH1YAR042W 3567 nt3.48□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms