Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RB1P06400 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.7■■□□□ 1.38
RB1P06400 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.7■■□□□ 1.38
RB1P06400 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.7■■□□□ 1.38
RB1P06400 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RB1P06400 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RB1P06400 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.7■■□□□ 1.38
RB1P06400 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.7■■□□□ 1.38
RB1P06400 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RB1P06400 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RB1P06400 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RB1P06400 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RB1P06400 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
RB1P06400 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RB1P06400 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.69■■□□□ 1.38
RB1P06400 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.69■■□□□ 1.38
RB1P06400 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RB1P06400 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RB1P06400 KRT19P1-201ENST00000405746 1186 ntBASIC23.69■■□□□ 1.38
RB1P06400 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.69■■□□□ 1.38
RB1P06400 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RB1P06400 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.69■■□□□ 1.38
RB1P06400 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.69■■□□□ 1.38
RB1P06400 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.69■■□□□ 1.38
RB1P06400 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RB1P06400 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RB1P06400 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RB1P06400 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.68■■□□□ 1.38
RB1P06400 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RB1P06400 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RB1P06400 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RB1P06400 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.68■■□□□ 1.38
RB1P06400 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.68■■□□□ 1.38
RB1P06400 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.68■■□□□ 1.38
RB1P06400 BX005040.4-201ENST00000637145 1518 ntBASIC23.68■■□□□ 1.38
RB1P06400 AC004854.2-201ENST00000608450 1441 ntBASIC23.67■■□□□ 1.38
RB1P06400 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RB1P06400 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RB1P06400 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.67■■□□□ 1.38
RB1P06400 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RB1P06400 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RB1P06400 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RB1P06400 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.67■■□□□ 1.38
RB1P06400 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.67■■□□□ 1.38
RB1P06400 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RB1P06400 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.67■■□□□ 1.38
RB1P06400 AP003733.4-201ENST00000623785 1697 ntBASIC23.67■■□□□ 1.38
RB1P06400 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RB1P06400 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RB1P06400 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.66■■□□□ 1.38
RB1P06400 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.66■■□□□ 1.38
RB1P06400 AC006970.2-201ENST00000450065 779 ntBASIC23.66■■□□□ 1.38
RB1P06400 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.66■■□□□ 1.38
RB1P06400 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.66■■□□□ 1.38
RB1P06400 AC068587.7-201ENST00000641602 218 ntBASIC23.66■■□□□ 1.38
RB1P06400 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RB1P06400 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RB1P06400 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.65■■□□□ 1.38
RB1P06400 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RB1P06400 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RB1P06400 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RB1P06400 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RB1P06400 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.65■■□□□ 1.38
RB1P06400 KRT18P11-201ENST00000435214 1283 ntBASIC23.65■■□□□ 1.38
RB1P06400 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.65■■□□□ 1.38
RB1P06400 AL109923.1-201ENST00000618799 583 ntBASIC23.65■■□□□ 1.38
RB1P06400 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RB1P06400 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RB1P06400 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
RB1P06400 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RB1P06400 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.64■■□□□ 1.38
RB1P06400 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RB1P06400 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RB1P06400 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
RB1P06400 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RB1P06400 CROCCP5-201ENST00000436658 830 ntBASIC23.64■■□□□ 1.37
RB1P06400 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.64■■□□□ 1.37
RB1P06400 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RB1P06400 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RB1P06400 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RB1P06400 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RB1P06400 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RB1P06400 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.63■■□□□ 1.37
RB1P06400 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
RB1P06400 ABHD17AP1-201ENST00000358206 933 ntBASIC23.63■■□□□ 1.37
RB1P06400 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RB1P06400 NCF1B-203ENST00000435988 1254 ntBASIC23.63■■□□□ 1.37
RB1P06400 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RB1P06400 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RB1P06400 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RB1P06400 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RB1P06400 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.62■■□□□ 1.37
RB1P06400 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.62■■□□□ 1.37
RB1P06400 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.62■■□□□ 1.37
RB1P06400 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.62■■□□□ 1.37
RB1P06400 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RB1P06400 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RB1P06400 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RB1P06400 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RB1P06400 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms