Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 NOP58YOR310C 1536 nt5.07□□□□□ -1.6
CDC9P04819 PSE1YMR308C 3270 nt5.06□□□□□ -1.6
CDC9P04819 TIM54YJL054W 1437 nt5.06□□□□□ -1.6
CDC9P04819 HIS4YCL030C 2400 nt5.06□□□□□ -1.6
CDC9P04819 ACS2YLR153C 2052 nt5.06□□□□□ -1.6
CDC9P04819 YMR111CYMR111C 1389 nt5.06□□□□□ -1.6
CDC9P04819 RTT106YNL206C 1368 nt5.06□□□□□ -1.6
CDC9P04819 NOB1YOR056C 1380 nt5.06□□□□□ -1.6
CDC9P04819 VHS2YIL135C 1311 nt5.06□□□□□ -1.6
CDC9P04819 PSY4YBL046W 1326 nt5.06□□□□□ -1.6
CDC9P04819 YDR042CYDR042C 603 nt5.06□□□□□ -1.6
CDC9P04819 YDR053WYDR053W 396 nt5.06□□□□□ -1.6
CDC9P04819 UTR4YEL038W 684 nt5.06□□□□□ -1.6
CDC9P04819 PRP18YGR006W 756 nt5.06□□□□□ -1.6
CDC9P04819 MIC26YGR235C 702 nt5.06□□□□□ -1.6
CDC9P04819 YIL060WYIL060W 435 nt5.06□□□□□ -1.6
CDC9P04819 APS3YJL024C 585 nt5.06□□□□□ -1.6
CDC9P04819 HOR7YMR251W-A 180 nt5.06□□□□□ -1.6
CDC9P04819 YNL019CYNL019C 855 nt5.06□□□□□ -1.6
CDC9P04819 YNL033WYNL033W 855 nt5.06□□□□□ -1.6
CDC9P04819 YNR025CYNR025C 360 nt5.06□□□□□ -1.6
CDC9P04819 SRL4YPL033C 846 nt5.06□□□□□ -1.6
CDC9P04819 MED8YBR193C 672 nt5.06□□□□□ -1.6
CDC9P04819 YJR015WYJR015W 1533 nt5.06□□□□□ -1.6
CDC9P04819 SAG1YJR004C 1953 nt5.05□□□□□ -1.6
CDC9P04819 VTC2YFL004W 2487 nt5.05□□□□□ -1.6
CDC9P04819 PDH1YPR002W 1551 nt5.05□□□□□ -1.6
CDC9P04819 GPM2YDL021W 936 nt5.05□□□□□ -1.6
CDC9P04819 HEM3YDL205C 984 nt5.05□□□□□ -1.6
CDC9P04819 SRB7YDR308C 423 nt5.05□□□□□ -1.6
CDC9P04819 YKL091CYKL091C 933 nt5.05□□□□□ -1.6
CDC9P04819 DCS1YLR270W 1053 nt5.05□□□□□ -1.6
CDC9P04819 YLR271WYLR271W 825 nt5.05□□□□□ -1.6
CDC9P04819 NBP1YLR457C 960 nt5.05□□□□□ -1.6
CDC9P04819 TRI1YMR233W 681 nt5.05□□□□□ -1.6
CDC9P04819 END3YNL084C 1050 nt5.05□□□□□ -1.6
CDC9P04819 SYC1YOR179C 567 nt5.05□□□□□ -1.6
CDC9P04819 FDH1YOR388C 1131 nt5.05□□□□□ -1.6
CDC9P04819 POP4YBR257W 840 nt5.05□□□□□ -1.6
CDC9P04819 CDC9YDL164C 2268 nt5.05□□□□□ -1.6
CDC9P04819 PWP1YLR196W 1731 nt5.05□□□□□ -1.6
CDC9P04819 YIR007WYIR007W 2295 nt5.04□□□□□ -1.6
CDC9P04819 ALD3YMR169C 1521 nt5.04□□□□□ -1.6
CDC9P04819 ALD2YMR170C 1521 nt5.04□□□□□ -1.6
CDC9P04819 MHR1YDR296W 681 nt5.04□□□□□ -1.6
CDC9P04819 RPN9YDR427W 1182 nt5.04□□□□□ -1.6
CDC9P04819 YGL006W-AYGL006W-A 111 nt5.04□□□□□ -1.6
CDC9P04819 YML047W-AYML047W-A 366 nt5.04□□□□□ -1.6
CDC9P04819 YAP7YOL028C 738 nt5.04□□□□□ -1.6
CDC9P04819 YBR116CYBR116C 528 nt5.04□□□□□ -1.6
CDC9P04819 snR32snR32 188 nt5.04□□□□□ -1.6
CDC9P04819 GZF3YJL110C 1656 nt5.04□□□□□ -1.6
CDC9P04819 HAP4YKL109W 1665 nt5.04□□□□□ -1.6
CDC9P04819 PDC1YLR044C 1692 nt5.04□□□□□ -1.6
CDC9P04819 BRF1YGR246C 1791 nt5.04□□□□□ -1.6
CDC9P04819 NUF2YOL069W 1356 nt5.04□□□□□ -1.6
CDC9P04819 OXP1YKL215C 3861 nt5.03□□□□□ -1.6
CDC9P04819 TRE1YPL176C 2352 nt5.03□□□□□ -1.6
CDC9P04819 YCR075W-AYCR075W-A 228 nt5.03□□□□□ -1.6
CDC9P04819 YCR097W-AYCR097W-A 267 nt5.03□□□□□ -1.6
CDC9P04819 tR(ACG)JtR(ACG)J 73 nt5.03□□□□□ -1.6
CDC9P04819 YKL151CYKL151C 1014 nt5.03□□□□□ -1.6
CDC9P04819 REH1YLR387C 1299 nt5.03□□□□□ -1.6
CDC9P04819 YOR034C-AYOR034C-A 243 nt5.03□□□□□ -1.6
CDC9P04819 SAS5YOR213C 747 nt5.03□□□□□ -1.6
CDC9P04819 MEF1YLR069C 2286 nt5.03□□□□□ -1.6
CDC9P04819 HPF1YOL155C 2904 nt5.03□□□□□ -1.6
CDC9P04819 PRO2YOR323C 1371 nt5.03□□□□□ -1.6
CDC9P04819 SSU1YPL092W 1377 nt5.03□□□□□ -1.6
CDC9P04819 FDC1YDR539W 1512 nt5.02□□□□□ -1.61
CDC9P04819 YEL077CYEL077C 3834 nt5.02□□□□□ -1.61
CDC9P04819 BAP2YBR068C 1830 nt5.02□□□□□ -1.61
CDC9P04819 YNR066CYNR066C 1311 nt5.02□□□□□ -1.61
CDC9P04819 SNU23YDL098C 585 nt5.02□□□□□ -1.61
CDC9P04819 snR83snR83 306 nt5.02□□□□□ -1.61
CDC9P04819 YEL010WYEL010W 351 nt5.02□□□□□ -1.61
CDC9P04819 CYC1YJR048W 330 nt5.02□□□□□ -1.61
CDC9P04819 RCN1YKL159C 636 nt5.02□□□□□ -1.61
CDC9P04819 YLR125WYLR125W 411 nt5.02□□□□□ -1.61
CDC9P04819 TDA5YLR426W 981 nt5.02□□□□□ -1.61
CDC9P04819 YMR158C-AYMR158C-A 138 nt5.02□□□□□ -1.61
CDC9P04819 RNA1YMR235C 1224 nt5.02□□□□□ -1.61
CDC9P04819 YPL068CYPL068C 882 nt5.02□□□□□ -1.61
CDC9P04819 STE20YHL007C 2820 nt5.01□□□□□ -1.61
CDC9P04819 ROG3YFR022W 2202 nt5.01□□□□□ -1.61
CDC9P04819 BUL1YMR275C 2931 nt5.01□□□□□ -1.61
CDC9P04819 RKM2YDR198C 1440 nt5.01□□□□□ -1.61
CDC9P04819 COX6YHR051W 447 nt5.01□□□□□ -1.61
CDC9P04819 SEC39YLR440C 2130 nt5.01□□□□□ -1.61
CDC9P04819 SAM37YMR060C 984 nt5.01□□□□□ -1.61
CDC9P04819 YBR230W-AYBR230W-A 201 nt5.01□□□□□ -1.61
CDC9P04819 SKM1YOL113W 1968 nt5.01□□□□□ -1.61
CDC9P04819 BUD7YOR299W 2241 nt5.01□□□□□ -1.61
CDC9P04819 YIG1YPL201C 1386 nt5.01□□□□□ -1.61
CDC9P04819 MNN2YBR015C 1794 nt5.01□□□□□ -1.61
CDC9P04819 NOP16YER002W 696 nt5□□□□□ -1.61
CDC9P04819 YGL138CYGL138C 1038 nt5□□□□□ -1.61
CDC9P04819 YHR173CYHR173C 339 nt5□□□□□ -1.61
CDC9P04819 TEF4YKL081W 1239 nt5□□□□□ -1.61
CDC9P04819 SRT1YMR101C 1032 nt5□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 47.7 ms