Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND4P03905 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND4P03905 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND4P03905 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.19■□□□□ 0.66
MT-ND4P03905 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MT-ND4P03905 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MT-ND4P03905 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND4P03905 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MT-ND4P03905 AC022616.5-201ENST00000518796 181 ntBASIC19.19■□□□□ 0.66
MT-ND4P03905 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND4P03905 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND4P03905 AC139530.1-201ENST00000575312 1977 ntBASIC19.19■□□□□ 0.66
MT-ND4P03905 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
MT-ND4P03905 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND4P03905 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
MT-ND4P03905 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND4P03905 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.18■□□□□ 0.66
MT-ND4P03905 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND4P03905 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MT-ND4P03905 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND4P03905 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.18■□□□□ 0.66
MT-ND4P03905 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.18■□□□□ 0.66
MT-ND4P03905 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND4P03905 AC011551.1-201ENST00000614101 683 ntBASIC19.18■□□□□ 0.66
MT-ND4P03905 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.18■□□□□ 0.66
MT-ND4P03905 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND4P03905 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MT-ND4P03905 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND4P03905 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
MT-ND4P03905 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND4P03905 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-ND4P03905 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND4P03905 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-ND4P03905 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND4P03905 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.17■□□□□ 0.66
MT-ND4P03905 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND4P03905 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND4P03905 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-ND4P03905 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND4P03905 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND4P03905 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MT-ND4P03905 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND4P03905 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MT-ND4P03905 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
MT-ND4P03905 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.17■□□□□ 0.66
MT-ND4P03905 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MT-ND4P03905 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
MT-ND4P03905 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 AC004987.1-201ENST00000428627 508 ntBASIC19.16■□□□□ 0.66
MT-ND4P03905 ATP5G2P3-201ENST00000429083 425 ntBASIC19.16■□□□□ 0.66
MT-ND4P03905 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.16■□□□□ 0.66
MT-ND4P03905 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.16■□□□□ 0.66
MT-ND4P03905 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 AC073130.3-201ENST00000624389 2278 ntBASIC19.16■□□□□ 0.66
MT-ND4P03905 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND4P03905 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
MT-ND4P03905 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.15■□□□□ 0.66
MT-ND4P03905 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 BHLHE23-202ENST00000612929 1109 ntBASIC19.15■□□□□ 0.66
MT-ND4P03905 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MT-ND4P03905 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MT-ND4P03905 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND4P03905 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.14■□□□□ 0.66
MT-ND4P03905 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MT-ND4P03905 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MT-ND4P03905 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.14■□□□□ 0.65
MT-ND4P03905 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND4P03905 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND4P03905 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND4P03905 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND4P03905 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND4P03905 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND4P03905 AL022069.1-201ENST00000568025 1636 ntBASIC19.14■□□□□ 0.65
MT-ND4P03905 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
MT-ND4P03905 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
MT-ND4P03905 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MT-ND4P03905 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND4P03905 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND4P03905 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND4P03905 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND4P03905 AC026310.3-201ENST00000625186 2373 ntBASIC19.13■□□□□ 0.65
MT-ND4P03905 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms