Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 CDCA4P2-201ENST00000441182 718 ntBASIC24.9■■□□□ 1.58
PGK1P00558 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.9■■□□□ 1.58
PGK1P00558 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.9■■□□□ 1.58
PGK1P00558 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.9■■□□□ 1.58
PGK1P00558 AP003733.4-201ENST00000623785 1697 ntBASIC24.89■■□□□ 1.58
PGK1P00558 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PGK1P00558 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PGK1P00558 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.89■■□□□ 1.58
PGK1P00558 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.89■■□□□ 1.58
PGK1P00558 AC073111.5-205ENST00000641717 521 ntBASIC24.89■■□□□ 1.58
PGK1P00558 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PGK1P00558 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
PGK1P00558 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
PGK1P00558 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PGK1P00558 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PGK1P00558 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.88■■□□□ 1.57
PGK1P00558 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.88■■□□□ 1.57
PGK1P00558 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.88■■□□□ 1.57
PGK1P00558 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.88■■□□□ 1.57
PGK1P00558 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PGK1P00558 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.88■■□□□ 1.57
PGK1P00558 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.88■■□□□ 1.57
PGK1P00558 TPRG1LP1-201ENST00000598702 760 ntBASIC24.88■■□□□ 1.57
PGK1P00558 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
PGK1P00558 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PGK1P00558 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PGK1P00558 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
PGK1P00558 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.87■■□□□ 1.57
PGK1P00558 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PGK1P00558 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.87■■□□□ 1.57
PGK1P00558 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PGK1P00558 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.87■■□□□ 1.57
PGK1P00558 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.87■■□□□ 1.57
PGK1P00558 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PGK1P00558 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PGK1P00558 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PGK1P00558 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PGK1P00558 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PGK1P00558 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PGK1P00558 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PGK1P00558 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PGK1P00558 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PGK1P00558 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.86■■□□□ 1.57
PGK1P00558 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.86■■□□□ 1.57
PGK1P00558 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PGK1P00558 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
PGK1P00558 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.86■■□□□ 1.57
PGK1P00558 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.86■■□□□ 1.57
PGK1P00558 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PGK1P00558 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PGK1P00558 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
PGK1P00558 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PGK1P00558 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PGK1P00558 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PGK1P00558 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.85■■□□□ 1.57
PGK1P00558 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PGK1P00558 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.85■■□□□ 1.57
PGK1P00558 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.85■■□□□ 1.57
PGK1P00558 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.85■■□□□ 1.57
PGK1P00558 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
PGK1P00558 AP004607.4-201ENST00000530158 1459 ntBASIC24.84■■□□□ 1.57
PGK1P00558 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.84■■□□□ 1.57
PGK1P00558 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.84■■□□□ 1.57
PGK1P00558 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.84■■□□□ 1.57
PGK1P00558 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.84■■□□□ 1.57
PGK1P00558 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.84■■□□□ 1.57
PGK1P00558 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.84■■□□□ 1.57
PGK1P00558 AC004854.2-201ENST00000608450 1441 ntBASIC24.84■■□□□ 1.57
PGK1P00558 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PGK1P00558 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.84■■□□□ 1.57
PGK1P00558 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
PGK1P00558 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
PGK1P00558 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PGK1P00558 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
PGK1P00558 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PGK1P00558 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.83■■□□□ 1.57
PGK1P00558 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PGK1P00558 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.83■■□□□ 1.57
PGK1P00558 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.83■■□□□ 1.57
PGK1P00558 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PGK1P00558 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PGK1P00558 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PGK1P00558 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PGK1P00558 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PGK1P00558 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
PGK1P00558 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PGK1P00558 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
PGK1P00558 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.82■■□□□ 1.56
PGK1P00558 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.82■■□□□ 1.56
PGK1P00558 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PGK1P00558 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PGK1P00558 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PGK1P00558 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
PGK1P00558 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PGK1P00558 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PGK1P00558 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PGK1P00558 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.81■■□□□ 1.56
PGK1P00558 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.81■■□□□ 1.56
PGK1P00558 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.81■■□□□ 1.56
PGK1P00558 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms