Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.51■□□□□ 0.55
ABCA1O95477 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.51■□□□□ 0.55
ABCA1O95477 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA1O95477 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.5■□□□□ 0.55
ABCA1O95477 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA1O95477 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA1O95477 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA1O95477 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ABCA1O95477 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA1O95477 AC141586.4-201ENST00000624558 1573 ntBASIC18.5■□□□□ 0.55
ABCA1O95477 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.5■□□□□ 0.55
ABCA1O95477 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA1O95477 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ABCA1O95477 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCA1O95477 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ABCA1O95477 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ABCA1O95477 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.5■□□□□ 0.55
ABCA1O95477 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCA1O95477 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.49■□□□□ 0.55
ABCA1O95477 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA1O95477 AC093323.1-202ENST00000635031 2045 ntBASIC18.49■□□□□ 0.55
ABCA1O95477 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA1O95477 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCA1O95477 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCA1O95477 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA1O95477 AC133637.1-201ENST00000624115 1537 ntBASIC18.49■□□□□ 0.55
ABCA1O95477 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA1O95477 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.49■□□□□ 0.55
ABCA1O95477 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCA1O95477 CDCA4P2-201ENST00000441182 718 ntBASIC18.49■□□□□ 0.55
ABCA1O95477 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA1O95477 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCA1O95477 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCA1O95477 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ABCA1O95477 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCA1O95477 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA1O95477 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ABCA1O95477 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA1O95477 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCA1O95477 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCA1O95477 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCA1O95477 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA1O95477 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA1O95477 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCA1O95477 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA1O95477 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA1O95477 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
ABCA1O95477 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA1O95477 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA1O95477 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCA1O95477 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCA1O95477 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCA1O95477 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA1O95477 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA1O95477 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
ABCA1O95477 ABHD17AP1-201ENST00000358206 933 ntBASIC18.46■□□□□ 0.55
ABCA1O95477 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.46■□□□□ 0.55
ABCA1O95477 AP005435.1-201ENST00000529293 1178 ntBASIC18.46■□□□□ 0.55
ABCA1O95477 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.46■□□□□ 0.55
ABCA1O95477 KRT18P61-201ENST00000585825 1298 ntBASIC18.46■□□□□ 0.55
ABCA1O95477 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ABCA1O95477 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.46■□□□□ 0.55
ABCA1O95477 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCA1O95477 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ABCA1O95477 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ABCA1O95477 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ABCA1O95477 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ABCA1O95477 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ABCA1O95477 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
ABCA1O95477 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
ABCA1O95477 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.46■□□□□ 0.54
ABCA1O95477 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.46■□□□□ 0.54
ABCA1O95477 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
ABCA1O95477 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ABCA1O95477 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ABCA1O95477 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ABCA1O95477 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ABCA1O95477 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ABCA1O95477 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.45■□□□□ 0.54
ABCA1O95477 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ABCA1O95477 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.45■□□□□ 0.54
ABCA1O95477 AC137761.2-201ENST00000561729 223 ntBASIC18.45■□□□□ 0.54
ABCA1O95477 AC145350.3-201ENST00000569033 163 ntBASIC18.45■□□□□ 0.54
ABCA1O95477 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.45■□□□□ 0.54
ABCA1O95477 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.45■□□□□ 0.54
ABCA1O95477 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ABCA1O95477 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ABCA1O95477 ESRRAP2-201ENST00000418437 1549 ntBASIC18.45■□□□□ 0.54
ABCA1O95477 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms