Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
PCF11O94913 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
PCF11O94913 KRT18P61-201ENST00000585825 1298 ntBASIC34.99■■■■□ 3.19
PCF11O94913 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC34.99■■■■□ 3.19
PCF11O94913 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
PCF11O94913 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC34.98■■■■□ 3.19
PCF11O94913 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC34.98■■■■□ 3.19
PCF11O94913 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC34.98■■■■□ 3.19
PCF11O94913 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC34.98■■■■□ 3.19
PCF11O94913 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
PCF11O94913 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC34.98■■■■□ 3.19
PCF11O94913 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC34.98■■■■□ 3.19
PCF11O94913 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
PCF11O94913 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
PCF11O94913 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
PCF11O94913 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC34.97■■■■□ 3.19
PCF11O94913 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
PCF11O94913 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
PCF11O94913 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC34.97■■■■□ 3.19
PCF11O94913 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
PCF11O94913 ABCB10P4-201ENST00000566803 2184 ntBASIC34.97■■■■□ 3.19
PCF11O94913 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
PCF11O94913 AP005435.1-201ENST00000529293 1178 ntBASIC34.96■■■■□ 3.19
PCF11O94913 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC34.96■■■■□ 3.19
PCF11O94913 STX4-202ENST00000394998 1498 ntTSL 2 BASIC34.96■■■■□ 3.19
PCF11O94913 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC34.96■■■■□ 3.19
PCF11O94913 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
PCF11O94913 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
PCF11O94913 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC34.96■■■■□ 3.19
PCF11O94913 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC34.96■■■■□ 3.19
PCF11O94913 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
PCF11O94913 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
PCF11O94913 KRT18P14-201ENST00000534205 1250 ntBASIC34.96■■■■□ 3.19
PCF11O94913 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC34.95■■■■□ 3.19
PCF11O94913 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
PCF11O94913 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC34.95■■■■□ 3.19
PCF11O94913 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
PCF11O94913 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
PCF11O94913 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.18
PCF11O94913 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC34.95■■■■□ 3.18
PCF11O94913 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC34.95■■■■□ 3.18
PCF11O94913 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC34.95■■■■□ 3.18
PCF11O94913 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC34.95■■■■□ 3.18
PCF11O94913 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
PCF11O94913 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PCF11O94913 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
PCF11O94913 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
PCF11O94913 TPRG1LP1-201ENST00000598702 760 ntBASIC34.94■■■■□ 3.18
PCF11O94913 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PCF11O94913 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PCF11O94913 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PCF11O94913 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PCF11O94913 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC34.94■■■■□ 3.18
PCF11O94913 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
PCF11O94913 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
PCF11O94913 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
PCF11O94913 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
PCF11O94913 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
PCF11O94913 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC34.93■■■■□ 3.18
PCF11O94913 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC34.93■■■■□ 3.18
PCF11O94913 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC34.93■■■■□ 3.18
PCF11O94913 AC004687.1-201ENST00000579003 1625 ntBASIC34.93■■■■□ 3.18
PCF11O94913 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC34.93■■■■□ 3.18
PCF11O94913 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
PCF11O94913 LHPP-203ENST00000392757 840 ntTSL 3 BASIC34.92■■■■□ 3.18
PCF11O94913 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
PCF11O94913 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
PCF11O94913 ABHD17AP1-201ENST00000358206 933 ntBASIC34.91■■■■□ 3.18
PCF11O94913 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC34.91■■■■□ 3.18
PCF11O94913 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
PCF11O94913 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
PCF11O94913 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC34.91■■■■□ 3.18
PCF11O94913 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC34.91■■■■□ 3.18
PCF11O94913 NT5C3AP1-201ENST00000394500 1012 ntBASIC34.91■■■■□ 3.18
PCF11O94913 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC34.91■■■■□ 3.18
PCF11O94913 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
PCF11O94913 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
PCF11O94913 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
PCF11O94913 ME3-201ENST00000323418 1068 ntTSL 5 BASIC34.9■■■■□ 3.18
PCF11O94913 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
PCF11O94913 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC34.9■■■■□ 3.18
PCF11O94913 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
PCF11O94913 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC34.89■■■■□ 3.18
PCF11O94913 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC34.89■■■■□ 3.18
PCF11O94913 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
PCF11O94913 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC34.89■■■■□ 3.18
PCF11O94913 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
PCF11O94913 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC34.88■■■■□ 3.17
PCF11O94913 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
PCF11O94913 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
PCF11O94913 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC34.87■■■■□ 3.17
PCF11O94913 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
PCF11O94913 DLX3-202ENST00000512495 834 ntTSL 2 BASIC34.87■■■■□ 3.17
PCF11O94913 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC34.87■■■■□ 3.17
PCF11O94913 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC34.87■■■■□ 3.17
PCF11O94913 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC34.87■■■■□ 3.17
PCF11O94913 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
PCF11O94913 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
PCF11O94913 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
PCF11O94913 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms