Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
TO15178 AL136162.1-201ENST00000607711 1078 ntBASIC20.43■□□□□ 0.86
TO15178 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TO15178 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TO15178 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TO15178 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.43■□□□□ 0.86
TO15178 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TO15178 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TO15178 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TO15178 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TO15178 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TO15178 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.42■□□□□ 0.86
TO15178 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TO15178 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.42■□□□□ 0.86
TO15178 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.42■□□□□ 0.86
TO15178 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TO15178 AC110285.6-201ENST00000617652 491 ntBASIC20.42■□□□□ 0.86
TO15178 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.42■□□□□ 0.86
TO15178 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TO15178 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TO15178 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TO15178 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.42■□□□□ 0.86
TO15178 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.42■□□□□ 0.86
TO15178 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
TO15178 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
TO15178 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TO15178 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.41■□□□□ 0.86
TO15178 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.41■□□□□ 0.86
TO15178 AC135279.3-201ENST00000610945 1311 ntBASIC20.41■□□□□ 0.86
TO15178 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TO15178 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TO15178 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TO15178 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TO15178 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TO15178 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TO15178 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TO15178 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TO15178 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.4■□□□□ 0.86
TO15178 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.4■□□□□ 0.86
TO15178 AC024257.2-201ENST00000549699 147 ntBASIC20.4■□□□□ 0.86
TO15178 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.4■□□□□ 0.86
TO15178 AL139246.5-201ENST00000606645 996 ntBASIC20.4■□□□□ 0.86
TO15178 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TO15178 AC106739.1-201ENST00000617035 715 ntBASIC20.4■□□□□ 0.86
TO15178 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TO15178 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TO15178 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.39■□□□□ 0.86
TO15178 AC004687.1-201ENST00000579003 1625 ntBASIC20.39■□□□□ 0.86
TO15178 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TO15178 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TO15178 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TO15178 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.39■□□□□ 0.85
TO15178 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.39■□□□□ 0.85
TO15178 OR2I1P-207ENST00000453522 948 ntBASIC20.39■□□□□ 0.85
TO15178 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TO15178 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TO15178 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TO15178 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.38■□□□□ 0.85
TO15178 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.38■□□□□ 0.85
TO15178 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TO15178 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.38■□□□□ 0.85
TO15178 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TO15178 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TO15178 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TO15178 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TO15178 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.38■□□□□ 0.85
TO15178 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.38■□□□□ 0.85
TO15178 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.38■□□□□ 0.85
TO15178 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
TO15178 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.38■□□□□ 0.85
TO15178 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.38■□□□□ 0.85
TO15178 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TO15178 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TO15178 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TO15178 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TO15178 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.37■□□□□ 0.85
TO15178 PBX2P1-201ENST00000493219 1291 ntBASIC20.37■□□□□ 0.85
TO15178 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.37■□□□□ 0.85
TO15178 AC133561.4-201ENST00000566112 224 ntBASIC20.37■□□□□ 0.85
TO15178 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TO15178 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TO15178 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.37■□□□□ 0.85
TO15178 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TO15178 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TO15178 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TO15178 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TO15178 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TO15178 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TO15178 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TO15178 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
TO15178 MIR4767-201ENST00000582827 78 ntBASIC20.36■□□□□ 0.85
TO15178 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TO15178 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.36■□□□□ 0.85
TO15178 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TO15178 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TO15178 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TO15178 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.35■□□□□ 0.85
TO15178 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.35■□□□□ 0.85
TO15178 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TO15178 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms