Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-6A6NCS4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 AL354811.1-201ENST00000610286 706 ntBASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-6A6NCS4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-6A6NCS4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NKX2-6A6NCS4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-6A6NCS4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-6A6NCS4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-6A6NCS4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-6A6NCS4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-6A6NCS4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-6A6NCS4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-6A6NCS4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-6A6NCS4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-6A6NCS4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
NKX2-6A6NCS4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-6A6NCS4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-6A6NCS4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-6A6NCS4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
NKX2-6A6NCS4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NKX2-6A6NCS4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NKX2-6A6NCS4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NKX2-6A6NCS4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NKX2-6A6NCS4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NKX2-6A6NCS4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 KRT18P14-201ENST00000534205 1250 ntBASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 NTF6G-201ENST00000591094 616 ntBASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-6A6NCS4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 AL499627.2-201ENST00000606283 725 ntBASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.63■□□□□ 0.73
NKX2-6A6NCS4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.62■□□□□ 0.73
NKX2-6A6NCS4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-6A6NCS4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-6A6NCS4 AC133561.1-201ENST00000568600 2415 ntBASIC19.61■□□□□ 0.73
NKX2-6A6NCS4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-6A6NCS4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms