Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC27P30260 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC27P30260 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC27P30260 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC27P30260 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC27P30260 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC27P30260 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC15.49■□□□□ 0.07
CDC27P30260 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.49■□□□□ 0.07
CDC27P30260 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.49■□□□□ 0.07
CDC27P30260 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDC27P30260 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.49■□□□□ 0.07
CDC27P30260 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.49■□□□□ 0.07
CDC27P30260 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 GGT8P-201ENST00000418938 532 ntBASIC15.49■□□□□ 0.07
CDC27P30260 KRT18P4-201ENST00000422599 1288 ntBASIC15.49■□□□□ 0.07
CDC27P30260 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDC27P30260 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 RN7SL128P-201ENST00000467883 305 ntBASIC15.49■□□□□ 0.07
CDC27P30260 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.49■□□□□ 0.07
CDC27P30260 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC15.49■□□□□ 0.07
CDC27P30260 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CDC27P30260 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 KRT8P38-201ENST00000441370 1430 ntBASIC15.49■□□□□ 0.07
CDC27P30260 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC27P30260 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC27P30260 MKRN7P-201ENST00000433469 1371 ntBASIC15.49■□□□□ 0.07
CDC27P30260 TUBB8P5-201ENST00000445286 1351 ntBASIC15.49■□□□□ 0.07
CDC27P30260 JAML-211ENST00000533261 1508 ntTSL 5 BASIC15.48■□□□□ 0.07
CDC27P30260 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.48■□□□□ 0.07
CDC27P30260 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC15.48■□□□□ 0.07
CDC27P30260 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDC27P30260 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDC27P30260 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC15.48■□□□□ 0.07
CDC27P30260 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDC27P30260 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDC27P30260 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC15.48■□□□□ 0.07
CDC27P30260 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDC27P30260 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CDC27P30260 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC15.48■□□□□ 0.07
CDC27P30260 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC15.48■□□□□ 0.07
CDC27P30260 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDC27P30260 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.48■□□□□ 0.07
CDC27P30260 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDC27P30260 ASS1P2-201ENST00000439895 1223 ntBASIC15.48■□□□□ 0.07
CDC27P30260 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC15.48■□□□□ 0.07
CDC27P30260 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC15.48■□□□□ 0.07
CDC27P30260 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC15.48■□□□□ 0.07
CDC27P30260 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.48■□□□□ 0.07
CDC27P30260 RN7SL396P-201ENST00000471086 295 ntBASIC15.48■□□□□ 0.07
CDC27P30260 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.48■□□□□ 0.07
CDC27P30260 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.48■□□□□ 0.07
CDC27P30260 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.48■□□□□ 0.07
CDC27P30260 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.48■□□□□ 0.07
CDC27P30260 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC15.48■□□□□ 0.07
CDC27P30260 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.48■□□□□ 0.07
CDC27P30260 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC15.48■□□□□ 0.07
CDC27P30260 MIR7845-201ENST00000618396 99 ntBASIC15.48■□□□□ 0.07
CDC27P30260 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDC27P30260 AC005274.1-201ENST00000623460 802 ntBASIC15.48■□□□□ 0.07
CDC27P30260 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC15.48■□□□□ 0.07
CDC27P30260 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC15.48■□□□□ 0.07
CDC27P30260 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDC27P30260 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CDC27P30260 AL672207.1-201ENST00000328462 1570 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms